[gmx-users] Question about DNA simulation

[Maik Goette]

Because it is?

The masses are defined in the .atp file. I dont't know how GROMACS 
handles the stuff, but that is sufficiant....Maybe Eric was a bit lazy...
Why do you care for that...?

Maik Goette, Dipl. Biol.
Max Planck Institute for Biophysical Chemistry
Theoretical & computational biophysics department
Am Fassberg 11
37077 Goettingen
Germany
Tel.  : ++49 551 201 2310
Fax   : ++49 551 201 2302
Email : mgoette[at]mpi-bpc.mpg.de
         mgoette2[at]gwdg.de
WWW   : http://www.mpibpc.gwdg.de/groups/grubmueller/


bo yang wrote:
> Hello,
> I have a question regarding DNA simulation.
> I have the amber99 package.
> Can anyone give me an explanation why all the masses in the 
> ffamberXXnb.itp are 0?
> 
> Thank you very much!
> Bo
> 
> 
> ------------------------------------------------------------------------
> 
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php