[gmx-users] Tool for visualizing disulphide bonds

[van Bemmelen]

Hi Ozge,

I'm not sure what you mean by "visualization". But what about using VMD
for trajectory visualization and creating a representation that contains
only the sulphur atoms forming the disulphide bonds?

If that doesn't answer your question, please be more specific.

Cheers,
Jeroen


>Date: Sun, 14 Oct 2007 15:45:24 +0300
>From: "OZGE ENGIN" <OZENGIN at KU.EDU.TR>
>Subject: [gmx-users] Tool for visualizing disulphide bonds
>To: gmx-users at gromacs.org
>Message-ID: <1192365924.491bc37cOZENGIN at KU.EDU.TR>
>Content-Type: text/plain; charset="UTF-8"
>
>Hi all,
>
>Is there any tool for the visualization of disulphide bonds 
>along the whole trajectory?
>
>Regards,
>
>Ozge