[gmx-users] Tool for visualizing disulphide bonds

[Yang Ye]

Program like VMD can draw extra bond. You need to get its manual and 
code a line or two in TCL.

Regards,
Yang Ye

On 10/14/2007 11:38 PM, van Bemmelen wrote:
> Hi Ozge,
>
> I'm not sure what you mean by "visualization". But what about using VMD
> for trajectory visualization and creating a representation that contains
> only the sulphur atoms forming the disulphide bonds?
>
> If that doesn't answer your question, please be more specific.
>
> Cheers,
> Jeroen
>
>
>   
>> Date: Sun, 14 Oct 2007 15:45:24 +0300
>> From: "OZGE ENGIN" <OZENGIN at KU.EDU.TR>
>> Subject: [gmx-users] Tool for visualizing disulphide bonds
>> To: gmx-users at gromacs.org
>> Message-ID: <1192365924.491bc37cOZENGIN at KU.EDU.TR>
>> Content-Type: text/plain; charset="UTF-8"
>>
>> Hi all,
>>
>> Is there any tool for the visualization of disulphide bonds 
>> along the whole trajectory?
>>
>> Regards,
>>
>> Ozge
>>     
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