[gmx-users] angle between helices

Berk Hess gmx3 at hotmail.com
Mon Oct 29 11:58:46 CET 2007

>From: "Anupam Nath Jha" <anupam at mbu.iisc.ernet.in>
>Reply-To: Discussion list for GROMACS users <gmx-users at gromacs.org>
>To: "Discussion list for GROMACS users" <gmx-users at gromacs.org>
>Subject: Re: [gmx-users] angle between helices
>Date: Mon, 29 Oct 2007 16:07:13 +0530 (IST)
>HI David
>there are options like g_helix, g_angle and as you said g_bundle, but none 
>them gives the angle between helix pairs.

g_bundle -h says (among other things):
the total tilt, the radial tilt and the lateral tilt with respect to
the average axis

If you have only two helices, you just need to multiple the g_bundle numbers
by two to get what you want.


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