[gmx-users] Solaris x86 instalation problem
David van der Spoel
spoel at xray.bmc.uu.se
Wed Sep 12 21:46:02 CEST 2007
André Melro wrote:
> Hi,
>
> I'm instaling gromacs in a Sun x86 machine with Solaris 10. Configure
> seams to be ok but when compiling an error ocourrs. Could any one help
> me?
maybe you should try with gcc first. the performance will be very
similar because of the assembly loops.
>
> Thanks
>
> the configure and compiling output:
>
> -bash-3.00$ ./configure
> checking build system type... i386-pc-solaris2.10
> checking host system type... i386-pc-solaris2.10
> checking for a BSD-compatible install... config/install-sh -c
> checking whether build environment is sane... yes
> checking for gawk... no
> checking for mawk... no
> checking for nawk... nawk
> checking whether make sets $(MAKE)... yes
> checking how to create a ustar tar archive... plaintar
> checking for cc... cc
> checking for C compiler default output file name... a.out
> checking whether the C compiler works... yes
> checking whether we are cross compiling... no
> checking for suffix of executables...
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... no
> checking whether cc accepts -g... yes
> checking for cc option to accept ANSI C... none needed
> checking for style of include used by make... GNU
> checking dependency style of cc... none
> checking how to run the C preprocessor... cc -E
> checking whether cc accepts -native -fast -xO5 -fsimple=2 -fnonstd
> -dalign... yes
> checking whether byte ordering is bigendian... no
> checking for egrep... egrep
> checking for ANSI C header files... yes
> checking for sys/types.h... yes
> checking for sys/stat.h... yes
> checking for stdlib.h... yes
> checking for string.h... yes
> checking for memory.h... yes
> checking for strings.h... yes
> checking for inttypes.h... yes
> checking for stdint.h... yes
> checking for unistd.h... yes
> checking for int... yes
> checking size of int... 4
> checking for long int... yes
> checking size of long int... 4
> checking for long long int... yes
> checking size of long long int... 8
> checking floating-point format... configure: WARNING: Unknown
> floating-point format
>
> checking for a BSD-compatible install... config/install-sh -c
> checking whether ln -s works... yes
> checking whether make sets $(MAKE)... (cached) yes
> checking for a sed that does not truncate output... /usr/bin/sed
> checking for non-GNU ld... /usr/ucb/ld
> checking if the linker (/usr/ucb/ld) is GNU ld... no
> checking for /usr/ucb/ld option to reload object files... -r
> checking for BSD-compatible nm... /usr/ccs/bin/nm -p
> checking how to recognise dependent libraries... pass_all
> checking dlfcn.h usability... yes
> checking dlfcn.h presence... yes
> checking for dlfcn.h... yes
> checking for g++... no
> checking for c++... no
> checking for gpp... no
> checking for aCC... no
> checking for CC... CC
> checking whether we are using the GNU C++ compiler... no
> checking whether CC accepts -g... yes
> checking dependency style of CC... none
> checking how to run the C++ preprocessor... CC -E
> checking the maximum length of command line arguments... 262144
> checking command to parse /usr/ccs/bin/nm -p output from cc object... ok
> checking for objdir... .libs
> checking for ar... false
> checking for ranlib... :
> checking for strip... :
> checking for cc option to produce PIC... -KPIC
> checking if cc PIC flag -KPIC works... yes
> checking if cc static flag -Bstatic works... no
> checking if cc supports -c -o file.o... yes
> checking whether the cc linker (/usr/ucb/ld) supports shared libraries... yes
> checking dynamic linker characteristics... solaris2.10 ld.so
> checking how to hardcode library paths into programs... immediate
> checking whether stripping libraries is possible... no
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... no
> checking whether to build static libraries... yes
> configure: creating libtool
> appending configuration tag "CXX" to libtool
> checking whether the CC linker (/usr/ucb/ld) supports shared libraries... yes
> checking for CC option to produce PIC... -KPIC
> checking if CC PIC flag -KPIC works... yes
> checking if CC static flag -Bstatic works... no
> checking if CC supports -c -o file.o... yes
> checking whether the CC linker (/usr/ucb/ld) supports shared libraries... yes
> checking dynamic linker characteristics... solaris2.10 ld.so
> checking how to hardcode library paths into programs... immediate
> appending configuration tag "F77" to libtool
> checking for special C compiler options needed for large files... no
> checking for _FILE_OFFSET_BITS value needed for large files... 64
> checking for _LARGE_FILES value needed for large files... no
> checking for _LARGEFILE_SOURCE value needed for large files... no
> checking for fseeko... yes
> checking for sqrt in -lm... yes
> checking for fftw3.h... yes
> checking for main in -lfftw3f... yes
> checking rpc/rpc.h usability... yes
> checking rpc/rpc.h presence... yes
> checking for rpc/rpc.h... yes
> checking for rpc/xdr.h... yes
> checking for xdr_float in -lnsl... yes
> checking for working memcmp... yes
> checking return type of signal handlers... void
> checking for vprintf... yes
> checking for _doprnt... yes
> checking if malloc debugging is wanted... no
> checking for strcasecmp... yes
> checking for strdup... yes
> checking for bool... no
> checking for X... libraries , headers
> checking for gethostbyname... yes
> checking for connect... no
> checking for connect in -lsocket... yes
> checking for remove... yes
> checking for shmat... yes
> checking for IceConnectionNumber in -lICE... yes
> checking for Motif... libraries in default path, headers in default path
> checking for libXext and libXp... yes
> checking limits.h usability... yes
> checking limits.h presence... yes
> checking for limits.h... yes
> checking for strings.h... (cached) yes
> checking for unistd.h... (cached) yes
> checking for unistd.h... (cached) yes
> checking for an ANSI C-conforming const... yes
> checking for size_t... yes
> checking whether struct tm is in sys/time.h or time.h... time.h
> checking for uid_t in sys/types.h... yes
> checking for inline... inline
> checking whether your compiler can handle assembly files (*.s)... yes
> checking whether as fully supports ia32 SSE... yes
> checking whether as fully supports ia32 3DNow! instructions... yes
> checking whether byte ordering is bigendian... (cached) no
> checking if the compiler supports gcc inline assembly... no
> checking if the compiler supports MSVC inline assembly... no
> configure: creating ./config.status
> config.status: creating Makefile
> config.status: creating src/Makefile
> config.status: creating src/gmxlib/Makefile
> config.status: creating src/gmxlib/gmx_blas/Makefile
> config.status: creating src/gmxlib/gmx_lapack/Makefile
> config.status: creating src/gmxlib/nonbonded/Makefile
> config.status: creating src/gmxlib/nonbonded/nb_kernel/Makefile
> config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_3dnow/Makefile
> config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_sse/Makefile
> config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_sse2/Makefile
> config.status: creating src/gmxlib/nonbonded/nb_kernel_x86_64_sse/Makefile
> config.status: creating src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/Makefile
> config.status: creating src/gmxlib/nonbonded/nb_kernel_ppc_altivec/Makefile
> config.status: creating src/gmxlib/nonbonded/nb_kernel_ia64_single/Makefile
> config.status: creating src/gmxlib/nonbonded/nb_kernel_ia64_double/Makefile
> config.status: creating include/Makefile
> config.status: creating include/types/Makefile
> config.status: creating src/mdlib/Makefile
> config.status: creating src/kernel/Makefile
> config.status: creating src/tools/Makefile
> config.status: creating src/ngmx/Makefile
> config.status: creating src/contrib/Makefile
> config.status: creating scripts/Makefile
> config.status: creating admin/Makefile
> config.status: creating share/Makefile
> config.status: creating share/tutor/Makefile
> config.status: creating share/tutor/gmxdemo/Makefile
> config.status: creating share/tutor/nmr1/Makefile
> config.status: creating share/tutor/nmr2/Makefile
> config.status: creating share/tutor/water/Makefile
> config.status: creating share/tutor/mixed/Makefile
> config.status: creating share/tutor/methanol/Makefile
> config.status: creating share/tutor/speptide/Makefile
> config.status: creating share/template/Makefile
> config.status: creating share/top/Makefile
> config.status: creating share/html/Makefile
> config.status: creating share/html/images/Makefile
> config.status: creating share/html/online/Makefile
> config.status: creating man/Makefile
> config.status: creating man/man1/Makefile
> config.status: creating src/config.h
> config.status: executing depfiles commands
>
> the compiling output:
>
> -bash-3.00$ dmake
> dmake: defaulting to parallel mode.
> See the man page dmake(1) for more information on setting up the .dmakerc file.
> Making all in include
> Making all in .
> Making all in types
> Making all in src
> dmake all-recursive
> Making all in gmxlib
> Making all in nonbonded
> Making all in nb_kernel_ia32_sse
> biopol --> 1 job
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel010_ia32_sse.lo
> nb_kernel010_ia32_sse.s
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel030_ia32_sse.lo
> nb_kernel030_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel030_ia32_sse.lo
> nb_kernel030_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel030_ia32_sse.s -o nb_kernel030_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel100_ia32_sse.lo
> nb_kernel100_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel010_ia32_sse.lo
> nb_kernel010_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel010_ia32_sse.s -o nb_kernel010_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel101_ia32_sse.lo
> nb_kernel101_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel101_ia32_sse.lo
> nb_kernel101_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel101_ia32_sse.s -o nb_kernel101_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel102_ia32_sse.lo
> nb_kernel102_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel100_ia32_sse.lo
> nb_kernel100_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel100_ia32_sse.s -o nb_kernel100_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel103_ia32_sse.lo
> nb_kernel103_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel103_ia32_sse.lo
> nb_kernel103_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel103_ia32_sse.s -o nb_kernel103_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel104_ia32_sse.lo
> nb_kernel104_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel102_ia32_sse.lo
> nb_kernel102_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel102_ia32_sse.s -o nb_kernel102_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel110_ia32_sse.lo
> nb_kernel110_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel110_ia32_sse.lo
> nb_kernel110_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel110_ia32_sse.s -o nb_kernel110_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel111_ia32_sse.lo
> nb_kernel111_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel104_ia32_sse.lo
> nb_kernel104_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel104_ia32_sse.s -o nb_kernel104_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel112_ia32_sse.lo
> nb_kernel112_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel111_ia32_sse.lo
> nb_kernel111_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel111_ia32_sse.s -o nb_kernel111_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel113_ia32_sse.lo
> nb_kernel113_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel112_ia32_sse.lo
> nb_kernel112_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel112_ia32_sse.s -o nb_kernel112_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel114_ia32_sse.lo
> nb_kernel114_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel113_ia32_sse.lo
> nb_kernel113_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel113_ia32_sse.s -o nb_kernel113_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel130_ia32_sse.lo
> nb_kernel130_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel114_ia32_sse.lo
> nb_kernel114_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel114_ia32_sse.s -o nb_kernel114_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel131_ia32_sse.lo
> nb_kernel131_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel130_ia32_sse.lo
> nb_kernel130_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel130_ia32_sse.s -o nb_kernel130_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel132_ia32_sse.lo
> nb_kernel132_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel131_ia32_sse.lo
> nb_kernel131_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel131_ia32_sse.s -o nb_kernel131_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel133_ia32_sse.lo
> nb_kernel133_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel132_ia32_sse.lo
> nb_kernel132_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel132_ia32_sse.s -o nb_kernel132_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel134_ia32_sse.lo
> nb_kernel134_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel133_ia32_sse.lo
> nb_kernel133_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel133_ia32_sse.s -o nb_kernel133_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel200_ia32_sse.lo
> nb_kernel200_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel200_ia32_sse.lo
> nb_kernel200_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel200_ia32_sse.s -o nb_kernel200_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel201_ia32_sse.lo
> nb_kernel201_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel134_ia32_sse.lo
> nb_kernel134_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel134_ia32_sse.s -o nb_kernel134_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel202_ia32_sse.lo
> nb_kernel202_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel201_ia32_sse.lo
> nb_kernel201_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel201_ia32_sse.s -o nb_kernel201_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel203_ia32_sse.lo
> nb_kernel203_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel202_ia32_sse.lo
> nb_kernel202_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel202_ia32_sse.s -o nb_kernel202_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel204_ia32_sse.lo
> nb_kernel204_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel203_ia32_sse.lo
> nb_kernel203_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel203_ia32_sse.s -o nb_kernel203_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel210_ia32_sse.lo
> nb_kernel210_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel204_ia32_sse.lo
> nb_kernel204_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel204_ia32_sse.s -o nb_kernel204_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel211_ia32_sse.lo
> nb_kernel211_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel210_ia32_sse.lo
> nb_kernel210_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel210_ia32_sse.s -o nb_kernel210_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel212_ia32_sse.lo
> nb_kernel212_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel211_ia32_sse.lo
> nb_kernel211_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel211_ia32_sse.s -o nb_kernel211_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel213_ia32_sse.lo
> nb_kernel213_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel212_ia32_sse.lo
> nb_kernel212_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel212_ia32_sse.s -o nb_kernel212_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel214_ia32_sse.lo
> nb_kernel214_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel213_ia32_sse.lo
> nb_kernel213_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel213_ia32_sse.s -o nb_kernel213_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel230_ia32_sse.lo
> nb_kernel230_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel214_ia32_sse.lo
> nb_kernel214_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel214_ia32_sse.s -o nb_kernel214_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel231_ia32_sse.lo
> nb_kernel231_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel230_ia32_sse.lo
> nb_kernel230_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel230_ia32_sse.s -o nb_kernel230_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel232_ia32_sse.lo
> nb_kernel232_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel231_ia32_sse.lo
> nb_kernel231_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel231_ia32_sse.s -o nb_kernel231_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel233_ia32_sse.lo
> nb_kernel233_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel232_ia32_sse.lo
> nb_kernel232_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel232_ia32_sse.s -o nb_kernel232_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel234_ia32_sse.lo
> nb_kernel234_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel233_ia32_sse.lo
> nb_kernel233_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel233_ia32_sse.s -o nb_kernel233_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel300_ia32_sse.lo
> nb_kernel300_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel234_ia32_sse.lo
> nb_kernel234_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel234_ia32_sse.s -o nb_kernel234_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel301_ia32_sse.lo
> nb_kernel301_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel300_ia32_sse.lo
> nb_kernel300_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel300_ia32_sse.s -o nb_kernel300_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel302_ia32_sse.lo
> nb_kernel302_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel301_ia32_sse.lo
> nb_kernel301_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel301_ia32_sse.s -o nb_kernel301_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel303_ia32_sse.lo
> nb_kernel303_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel302_ia32_sse.lo
> nb_kernel302_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel302_ia32_sse.s -o nb_kernel302_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel304_ia32_sse.lo
> nb_kernel304_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel303_ia32_sse.lo
> nb_kernel303_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel303_ia32_sse.s -o nb_kernel303_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel310_ia32_sse.lo
> nb_kernel310_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel310_ia32_sse.lo
> nb_kernel310_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel310_ia32_sse.s -o nb_kernel310_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel311_ia32_sse.lo
> nb_kernel311_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel304_ia32_sse.lo
> nb_kernel304_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel304_ia32_sse.s -o nb_kernel304_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel312_ia32_sse.lo
> nb_kernel312_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel311_ia32_sse.lo
> nb_kernel311_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel311_ia32_sse.s -o nb_kernel311_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel313_ia32_sse.lo
> nb_kernel313_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel312_ia32_sse.lo
> nb_kernel312_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel312_ia32_sse.s -o nb_kernel312_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel314_ia32_sse.lo
> nb_kernel314_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel313_ia32_sse.lo
> nb_kernel313_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel313_ia32_sse.s -o nb_kernel313_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel330_ia32_sse.lo
> nb_kernel330_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel314_ia32_sse.lo
> nb_kernel314_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel314_ia32_sse.s -o nb_kernel314_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel331_ia32_sse.lo
> nb_kernel331_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel330_ia32_sse.lo
> nb_kernel330_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel330_ia32_sse.s -o nb_kernel330_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel332_ia32_sse.lo
> nb_kernel332_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel331_ia32_sse.lo
> nb_kernel331_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel331_ia32_sse.s -o nb_kernel331_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel333_ia32_sse.lo
> nb_kernel333_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel332_ia32_sse.lo
> nb_kernel332_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel332_ia32_sse.s -o nb_kernel332_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel334_ia32_sse.lo
> nb_kernel334_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel333_ia32_sse.lo
> nb_kernel333_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel333_ia32_sse.s -o nb_kernel333_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel400_ia32_sse.lo
> nb_kernel400_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel334_ia32_sse.lo
> nb_kernel334_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel334_ia32_sse.s -o nb_kernel334_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel410_ia32_sse.lo
> nb_kernel410_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel400_ia32_sse.lo
> nb_kernel400_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel400_ia32_sse.s -o nb_kernel400_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel430_ia32_sse.lo
> nb_kernel430_ia32_sse.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel410_ia32_sse.lo
> nb_kernel410_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel410_ia32_sse.s -o nb_kernel410_ia32_sse.o
> biopol --> 2 jobs
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel_ia32_sse_test_asm.lo
> nb_kernel_ia32_sse_test_asm.s
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel430_ia32_sse.lo
> nb_kernel430_ia32_sse.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel430_ia32_sse.s -o nb_kernel430_ia32_sse.o
> biopol --> 2 jobs
> source='nb_kernel_ia32_sse.c' object='nb_kernel_ia32_sse.lo' libtool=yes \
> DEPDIR=.deps depmode=none /bin/bash ../../../../config/depcomp \
> /bin/bash ../../../../libtool --tag=CC --mode=compile cc
> -DHAVE_CONFIG_H -I. -I. -I../../../../src -I../../../../include
> -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"
> -I/usr/local/fftw-3.0.1/include/ -native -fast -xO5 -fsimple=2
> -fnonstd -dalign -c -o nb_kernel_ia32_sse.lo nb_kernel_ia32_sse.c
> biopol --> Job output
> /bin/bash ../../../../libtool --mode=compile cc -native -fast -xO5
> -fsimple=2 -fnonstd -dalign -c -o nb_kernel_ia32_sse_test_asm.lo
> nb_kernel_ia32_sse_test_asm.s
> cc -native -fast -xO5 -fsimple=2 -fnonstd -dalign -c
> nb_kernel_ia32_sse_test_asm.s -o nb_kernel_ia32_sse_test_asm.o
> biopol --> Job output
> source='nb_kernel_ia32_sse.c' object='nb_kernel_ia32_sse.lo' libtool=yes \
> DEPDIR=.deps depmode=none /bin/bash ../../../../config/depcomp \
> /bin/bash ../../../../libtool --tag=CC --mode=compile cc
> -DHAVE_CONFIG_H -I. -I. -I../../../../src -I../../../../include
> -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"
> -I/usr/local/fftw-3.0.1/include/ -native -fast -xO5 -fsimple=2
> -fnonstd -dalign -c -o nb_kernel_ia32_sse.lo nb_kernel_ia32_sse.c
> cc -DHAVE_CONFIG_H -I. -I. -I../../../../src -I../../../../include
> -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"
> -I/usr/local/fftw-3.0.1/include/ -native -fast -xO5 -fsimple=2
> -fnonstd -dalign -c nb_kernel_ia32_sse.c -o nb_kernel_ia32_sse.o
> biopol --> 1 job
> /bin/bash ../../../../libtool --tag=CC --mode=link cc -native -fast
> -xO5 -fsimple=2 -fnonstd -dalign -L/usr/local/fftw-3.0.1/lib
> -L/usr/ucblib -o libnb_kernel_ia32_sse.la nb_kernel010_ia32_sse.lo
> nb_kernel030_ia32_sse.lo nb_kernel100_ia32_sse.lo
> nb_kernel101_ia32_sse.lo nb_kernel102_ia32_sse.lo
> nb_kernel103_ia32_sse.lo nb_kernel104_ia32_sse.lo
> nb_kernel110_ia32_sse.lo nb_kernel111_ia32_sse.lo
> nb_kernel112_ia32_sse.lo nb_kernel113_ia32_sse.lo
> nb_kernel114_ia32_sse.lo nb_kernel130_ia32_sse.lo
> nb_kernel131_ia32_sse.lo nb_kernel132_ia32_sse.lo
> nb_kernel133_ia32_sse.lo nb_kernel134_ia32_sse.lo
> nb_kernel200_ia32_sse.lo nb_kernel201_ia32_sse.lo
> nb_kernel202_ia32_sse.lo nb_kernel203_ia32_sse.lo
> nb_kernel204_ia32_sse.lo nb_kernel210_ia32_sse.lo
> nb_kernel211_ia32_sse.lo nb_kernel212_ia32_sse.lo
> nb_kernel213_ia32_sse.lo nb_kernel214_ia32_sse.lo
> nb_kernel230_ia32_sse.lo nb_kernel231_ia32_sse.lo
> nb_kernel232_ia32_sse.lo nb_kernel233_ia32_sse.lo
> nb_kernel234_ia32_sse.lo nb_kernel300_ia32_sse.lo
> nb_kernel301_ia32_sse.lo nb_kernel302_ia32_sse.lo
> nb_kernel303_ia32_sse.lo nb_kernel304_ia32_sse.lo
> nb_kernel310_ia32_sse.lo nb_kernel311_ia32_sse.lo
> nb_kernel312_ia32_sse.lo nb_kernel313_ia32_sse.lo
> nb_kernel314_ia32_sse.lo nb_kernel330_ia32_sse.lo
> nb_kernel331_ia32_sse.lo nb_kernel332_ia32_sse.lo
> nb_kernel333_ia32_sse.lo nb_kernel334_ia32_sse.lo
> nb_kernel400_ia32_sse.lo nb_kernel410_ia32_sse.lo
> nb_kernel430_ia32_sse.lo nb_kernel_ia32_sse_test_asm.lo
> nb_kernel_ia32_sse.lo -lnsl -lfftw3f -lm -lXm -lXt -lSM -lICE
> -lXext -lXp -lX11 -lsocket
> biopol --> Job output
> /bin/bash ../../../../libtool --tag=CC --mode=link cc -native -fast
> -xO5 -fsimple=2 -fnonstd -dalign -L/usr/local/fftw-3.0.1/lib
> -L/usr/ucblib -o libnb_kernel_ia32_sse.la nb_kernel010_ia32_sse.lo
> nb_kernel030_ia32_sse.lo nb_kernel100_ia32_sse.lo
> nb_kernel101_ia32_sse.lo nb_kernel102_ia32_sse.lo
> nb_kernel103_ia32_sse.lo nb_kernel104_ia32_sse.lo
> nb_kernel110_ia32_sse.lo nb_kernel111_ia32_sse.lo
> nb_kernel112_ia32_sse.lo nb_kernel113_ia32_sse.lo
> nb_kernel114_ia32_sse.lo nb_kernel130_ia32_sse.lo
> nb_kernel131_ia32_sse.lo nb_kernel132_ia32_sse.lo
> nb_kernel133_ia32_sse.lo nb_kernel134_ia32_sse.lo
> nb_kernel200_ia32_sse.lo nb_kernel201_ia32_sse.lo
> nb_kernel202_ia32_sse.lo nb_kernel203_ia32_sse.lo
> nb_kernel204_ia32_sse.lo nb_kernel210_ia32_sse.lo
> nb_kernel211_ia32_sse.lo nb_kernel212_ia32_sse.lo
> nb_kernel213_ia32_sse.lo nb_kernel214_ia32_sse.lo
> nb_kernel230_ia32_sse.lo nb_kernel231_ia32_sse.lo
> nb_kernel232_ia32_sse.lo nb_kernel233_ia32_sse.lo
> nb_kernel234_ia32_sse.lo nb_kernel300_ia32_sse.lo
> nb_kernel301_ia32_sse.lo nb_kernel302_ia32_sse.lo
> nb_kernel303_ia32_sse.lo nb_kernel304_ia32_sse.lo
> nb_kernel310_ia32_sse.lo nb_kernel311_ia32_sse.lo
> nb_kernel312_ia32_sse.lo nb_kernel313_ia32_sse.lo
> nb_kernel314_ia32_sse.lo nb_kernel330_ia32_sse.lo
> nb_kernel331_ia32_sse.lo nb_kernel332_ia32_sse.lo
> nb_kernel333_ia32_sse.lo nb_kernel334_ia32_sse.lo
> nb_kernel400_ia32_sse.lo nb_kernel410_ia32_sse.lo
> nb_kernel430_ia32_sse.lo nb_kernel_ia32_sse_test_asm.lo
> nb_kernel_ia32_sse.lo -lnsl -lfftw3f -lm -lXm -lXt -lSM -lICE
> -lXext -lXp -lX11 -lsocket
> mkdir .libs
> false cru .libs/libnb_kernel_ia32_sse.a nb_kernel010_ia32_sse.o
> nb_kernel030_ia32_sse.o nb_kernel100_ia32_sse.o
> nb_kernel101_ia32_sse.o nb_kernel102_ia32_sse.o
> nb_kernel103_ia32_sse.o nb_kernel104_ia32_sse.o
> nb_kernel110_ia32_sse.o nb_kernel111_ia32_sse.o
> nb_kernel112_ia32_sse.o nb_kernel113_ia32_sse.o
> nb_kernel114_ia32_sse.o nb_kernel130_ia32_sse.o
> nb_kernel131_ia32_sse.o nb_kernel132_ia32_sse.o
> nb_kernel133_ia32_sse.o nb_kernel134_ia32_sse.o
> nb_kernel200_ia32_sse.o nb_kernel201_ia32_sse.o
> nb_kernel202_ia32_sse.o nb_kernel203_ia32_sse.o
> nb_kernel204_ia32_sse.o nb_kernel210_ia32_sse.o
> nb_kernel211_ia32_sse.o nb_kernel212_ia32_sse.o
> nb_kernel213_ia32_sse.o nb_kernel214_ia32_sse.o
> nb_kernel230_ia32_sse.o nb_kernel231_ia32_sse.o
> nb_kernel232_ia32_sse.o nb_kernel233_ia32_sse.o
> nb_kernel234_ia32_sse.o nb_kernel300_ia32_sse.o
> nb_kernel301_ia32_sse.o nb_kernel302_ia32_sse.o
> nb_kernel303_ia32_sse.o nb_kernel304_ia32_sse.o
> nb_kernel310_ia32_sse.o nb_kernel311_ia32_sse.o
> nb_kernel312_ia32_sse.o nb_kernel313_ia32_sse.o
> nb_kernel314_ia32_sse.o nb_kernel330_ia32_sse.o
> nb_kernel331_ia32_sse.o nb_kernel332_ia32_sse.o
> nb_kernel333_ia32_sse.o nb_kernel334_ia32_sse.o
> nb_kernel400_ia32_sse.o nb_kernel410_ia32_sse.o
> nb_kernel430_ia32_sse.o nb_kernel_ia32_sse_test_asm.o
> nb_kernel_ia32_sse.o
> *** Error code 1
> dmake: Fatal error: Command failed for target `libnb_kernel_ia32_sse.la'
> Current working directory
> /home/andre/gromacs-3.3.1/src/gmxlib/nonbonded/nb_kernel_ia32_sse
> *** Error code 1
> The following command caused the error:
> failcom='exit 1'; \
> for f in x $MAKEFLAGS; do \
> case $f in \
> *=* | --[!k]*);; \
> *k*) failcom='fail=yes';; \
> esac; \
> done; \
> dot_seen=no; \
> target=`echo all-recursive | sed s/-recursive//`; \
> list='nb_kernel_ia32_sse nb_kernel_ia32_3dnow
> nb_kernel'; for subdir in $list; do \
> echo "Making $target in $subdir"; \
> if test "$subdir" = "."; then \
> dot_seen=yes; \
> local_target="$target-am"; \
> else \
> local_target="$target"; \
> fi; \
> (cd $subdir && dmake $local_target) \
> || eval $failcom; \
> done; \
> if test "$dot_seen" = "no"; then \
> dmake "$target-am" || exit 1; \
> fi; test -z "$fail"
> dmake: Fatal error: Command failed for target `all-recursive'
> Current working directory /home/andre/gromacs-3.3.1/src/gmxlib/nonbonded
> *** Error code 1
> The following command caused the error:
> failcom='exit 1'; \
> for f in x $MAKEFLAGS; do \
> case $f in \
> *=* | --[!k]*);; \
> *k*) failcom='fail=yes';; \
> esac; \
> done; \
> dot_seen=no; \
> target=`echo all-recursive | sed s/-recursive//`; \
> list='nonbonded gmx_blas gmx_lapack'; for subdir in $list; do \
> echo "Making $target in $subdir"; \
> if test "$subdir" = "."; then \
> dot_seen=yes; \
> local_target="$target-am"; \
> else \
> local_target="$target"; \
> fi; \
> (cd $subdir && dmake $local_target) \
> || eval $failcom; \
> done; \
> if test "$dot_seen" = "no"; then \
> dmake "$target-am" || exit 1; \
> fi; test -z "$fail"
> dmake: Fatal error: Command failed for target `all-recursive'
> Current working directory /home/andre/gromacs-3.3.1/src/gmxlib
> *** Error code 1
> The following command caused the error:
> failcom='exit 1'; \
> for f in x $MAKEFLAGS; do \
> case $f in \
> *=* | --[!k]*);; \
> *k*) failcom='fail=yes';; \
> esac; \
> done; \
> dot_seen=no; \
> target=`echo all-recursive | sed s/-recursive//`; \
> list='gmxlib mdlib kernel tools ngmx contrib'; for subdir in $list; do \
> echo "Making $target in $subdir"; \
> if test "$subdir" = "."; then \
> dot_seen=yes; \
> local_target="$target-am"; \
> else \
> local_target="$target"; \
> fi; \
> (cd $subdir && dmake $local_target) \
> || eval $failcom; \
> done; \
> if test "$dot_seen" = "no"; then \
> dmake "$target-am" || exit 1; \
> fi; test -z "$fail"
> dmake: Fatal error: Command failed for target `all-recursive'
> Current working directory /home/andre/gromacs-3.3.1/src
> *** Error code 1
> dmake: Fatal error: Command failed for target `all'
> Current working directory /home/andre/gromacs-3.3.1/src
> *** Error code 1
> The following command caused the error:
> failcom='exit 1'; \
> for f in x $MAKEFLAGS; do \
> case $f in \
> *=* | --[!k]*);; \
> *k*) failcom='fail=yes';; \
> esac; \
> done; \
> dot_seen=no; \
> target=`echo all-recursive | sed s/-recursive//`; \
> list='include src admin scripts share man'; for subdir in $list; do \
> echo "Making $target in $subdir"; \
> if test "$subdir" = "."; then \
> dot_seen=yes; \
> local_target="$target-am"; \
> else \
> local_target="$target"; \
> fi; \
> (cd $subdir && dmake $local_target) \
> || eval $failcom; \
> done; \
> if test "$dot_seen" = "no"; then \
> dmake "$target-am" || exit 1; \
> fi; test -z "$fail"
> dmake: Fatal error: Command failed for target `all-recursive'
> -bash-3.00$
> _______________________________________________
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--
David van der Spoel, Ph.D.
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone: +46184714205. Fax: +4618511755.
spoel at xray.bmc.uu.se spoel at gromacs.org http://folding.bmc.uu.se
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