[gmx-users] infelicity in installation of 4.0.2

[Florian Haberl]

Hi,

On Tuesday, 2. December 2008, Martyn Winn wrote:
> Hi all,
>
> I've compiled 4.0.2 from source on an EM64T machine running Ubuntu,
> using ./configure --enable-shared
> With all executables I've tried, I find:
>
> mdw at ccp4v:~/gromacs/test_installation$ editconf
>
>                          :-)  G  R  O  M  A  C  S  (-:
>
> *** stack smashing detected ***: editconf terminated
> Segmentation fault
> mdw at ccp4v:~/gromacs/test_installation$ which editconf
> /usr/local/gromacs/bin/editconf
> mdw at ccp4v:~/gromacs/test_installation$ /usr/local/gromacs/bin/editconf
>
>                          :-)  G  R  O  M  A  C  S  (-:
>
>                  Good ROcking Metal Altar for Chronical Sinners
>
>                             :-)  VERSION 4.0.2  (-:
>
> i.e. it only runs fine if I specify the full path. Searching the
> archives, I found that this was reported in April 07, with a reply that
> it will be fixed in 3.3.2
>
> Nothing more recent came up, but apologies if I missed it.

can you paste the output of ldd $your_executable?

Have you sourced the GMXRC file?


Greetings,

Florian


-- 
-------------------------------------------------------------------------------
 Dr. Florian Haberl                        
 Computer-Chemie-Centrum   
 Universitaet Erlangen/ Nuernberg
 Naegelsbachstr 25
 D-91052 Erlangen
 Telephone:  	+49(0) − 9131 − 85 26573
 Mailto: florian.haberl AT chemie.uni-erlangen.de
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