[gmx-users] problem regarding pr.mdp file of protein embedded in popc

Mark Abraham Mark.Abraham at anu.edu.au
Sun Feb 24 12:31:27 CET 2008

sudheer babu wrote:
> Dear gmx-users,
> I have inserted my protein into membrane. I did energy minimisation with 
> Steepest descent, that output used for input of position restrain, this 
> "EM out.gro" structure is fine . When I do Position restrain, this step  
> goes fine  but,  popc structure of " PR out.gro " looks tilted.  Where 
> is the error happening?

So far you haven't described an error. If you're worried about 
"[looking] tilted" then you're going to need to describe better.


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