[gmx-users] do_dssp file format

[David van der Spoel]

ABEL Stephane 175950 wrote:
> I am back :(
> 
> The procedure i did
> 
> 1) do_dssp -s test-Struc.pdb -f test-Struc.pdb -dt 1 -o ss.xpm
> The menu appears I choose 5 (Main Chain) and I obtained the following message 
try running normal dssp first

dssp pdbfile

to see if dssp works

-- 
David van der Spoel, Ph.D.
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone:	+46184714205. Fax: +4618511755.
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se