[gmx-users] parallel compilation fails

David van der Spoel spoel at xray.bmc.uu.se
Mon Jan 21 19:46:13 CET 2008

gleb solomentsev wrote:
> Hi,
> I am trying to install a parallel version of Gromacs v3.3.1 and the 
> compilation fails. I have installed both single and double precision 
> versions and these work fine, however with the parallel installation I 
> get the following errors bellow during the make phase. I suppose that 
> these are problems with the installed MPI libraries but I am not sure as 
> to the nature of the problem or how to go about solving it. I would 
> greatly appreciate any suggestions and advice.
> The cluster is running on x86_64 quad core Intel Xeons.
> Thanks in advance,
> Gleb
configure --without-motif-includes

David van der Spoel, Ph.D.
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone:	+46184714205. Fax: +4618511755.
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se

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