[gmx-users] Adding OH- ions to a system

Ran Friedman r.friedman at bioc.uzh.ch
Mon Jan 28 09:55:55 CET 2008


Hi Subhrangshu,
There's usually not much point in adding OH- ions since they're not
regular ions that diffuse in the system, but rather form via
decomposition of water. If you need to study a system with those ions
try using ab initio MD.
Ran.

Subhrangshu Supakar wrote:
> Hi all,
> How can I add OH- ions to my system (NA+ water OH-)?
> How can I create the topology and cal culate the partial charges?
>
> Thanks in advance,
> Subhrangshu Supakar
> WBUT, Kolkata, India.
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