[gmx-users] make_hole error installation

Landry.CHARLIER at unice.fr Landry.CHARLIER at unice.fr
Wed Jan 30 17:22:47 CET 2008


Hi

I try to install gromacs with make_hole utility so I download the
gromacs-3.3.2.tar.gz, I uncompress it, I download the mdrun_make_hole.tar.gz and
uncompress it in the gromacs folder. After the ./configure command which
completed successfully, I run the make command and I get the following error
(the same that pragya chohan
http://www.gromacs.org/pipermail/gmx-users/2007-November/030613.html ): 

nonbonded.c: In function 'do_nonbonded':
nonbonded.c:272: error: 'esolSPC' undeclared (first use in this function)
nonbonded.c:272: error: (Each undeclared identifier is reported only once
nonbonded.c:272: error: for each function it appears in.)
nonbonded.c:276: error: 'esolTIP4P' undeclared (first use in this function)
nonbonded.c:472: error: 'enlistWATER' undeclared (first use in this function)
nonbonded.c:476: error: 'enlistWATERWATER' undeclared (first use in this function)
nonbonded.c: In function 'do_nonbonded14':
nonbonded.c:542: error: 'eelRF_NEC' undeclared (first use in this function)
nonbonded.c:569: error: 'epbcFULL' undeclared (first use in this function)
make[5]: *** [nonbonded.lo] Error 1
make[5]: Leaving directory `/usr/local/gromacs-3.3.2/src/gmxlib/nonbonded'
make[4]: *** [all-recursive] Error 1
make[4]: Leaving directory `/usr/local/gromacs-3.3.2/src/gmxlib/nonbonded'
make[3]: *** [all-recursive] Error 1
make[3]: Leaving directory `/usr/local/gromacs-3.3.2/src/gmxlib'
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory `/usr/local/gromacs-3.3.2/src'
make[1]: *** [all] Error 2
make[1]: Leaving directory `/usr/local/gromacs-3.3.2/src'
make: *** [all-recursive] Error 1

However, after, I get no error when I install gromacs without the make_hole
utility, so the problem comes from make_hole...

Thanks in advance 


-- 
Landry Charlier, PhD student
Lab. LCMBA, Dept of Chemistry
Team Chemometrics and Molecular Modeling
University of Nice, parc Valrose
06108 Nice Cedex2 France



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