[gmx-users] Time evolution of lipidbilayer
minnale_gnos at rediffmail.com
Mon Jun 9 13:13:29 CEST 2008
This may be a trivial question
I want to calculate "time evolution of area per lipid"
The steps I have done are
1. Extracted BoxX and BoxY values of 5ns_popc.edr by using g_energy command.
2. I have written code for calculating area per lipid in way that boxX multiply with boxY divided by 64
3. I have got the plot in this way
**0 to 1000ps ---- started the value 0.609678 nm^2/N ended with 0.642679(shows high peak)
**then 1000 to 4000ps shows silght variation with 0.64 value( nearly straight line)
**at 4000ps the value increased to 0.653465 ( high peak) from there it reduced again to 0.647856
I want to ask you that the way values are got correct? and suggest me some articles regarding area per lipid
Thanks for your aprreciation.
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