[gmx-users] simulating Ubiquitinated protein

AJIT DATTA adatta4 at jhmi.edu
Tue Jun 10 18:40:15 CEST 2008

I am trying to do MD simulation of a ubiquitinated protein. (C-terminal linked to a lysine residue via an isopeptide bond).
But I am not being able to define the isopeptide link. can someone help me out in this?

Ajit B.

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