[gmx-users] Problem of *tpbconv

[Mark Abraham]

sudheer babu wrote:
> Hi all,
> My production run  got stopped mid of the simulation, then I tried to 
> generate run inputfile by using *tpbconv for that tag following files 
> used .tpr , .edr and .trr
> tpbconv -s  prt.tpr   -f .trr  -e .edr  -o out.tpr
> but it's showing error which I pasted below
> 
> trn version: GMX_trn_file (single precision)
> Read frame   1430: step 142900 time  285.800
> 
> Using frame of step 142900 time 285.8
> Opened prt.edr as single precision energy file
> Reading frame   1400 time  280.000          
> Last frame read 1428                              
> WARNING: Incomplete frame: nr   1429 time  285.600    
> 
> -------------------------------------------------------
> Program tpbconv, VERSION 3.3.1
> Source code file: enxio.c, line: 401
> 
> Fatal error:
> Could not find frame with time 285.800018 in 'prt.edr
> 
> 
> Could anyone explian what is the cause of the error
> Thanks in advance......

Check out http://wiki.gromacs.org/index.php/Doing_Restarts#After_a_crash

Mark