[gmx-users] SGI installation problem

Siavoush Dastmalchi Dastmalchi.s at tbzmed.ac.ir
Sun Mar 16 13:14:24 CET 2008


Hi,
I did the following changes and it seems that problem has been fixed. But, then again I got the error saying that:
syntax error in makefile line xxx ( I can't remember the exact error message now).
Here is the changes on the make_edi file:
 
{ evStepOptions[evLINFIX], FALSE, etSTR, {&evParams[evLINFIX]}, was changed to:
{"-linfix", FALSE, etSTR, {&evSelections[evLINFIX]}, 

I am starting over again from configuration step and will let you know the result.
By the way, I got the syntax error for makefile at the same line when I was doing distclean. 
 
Cheers, Siavoush

________________________________

From: gmx-users-bounces at gromacs.org on behalf of Erik Lindahl
Sent: Sun 2008/03/16 03:26 ب.ظ
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] SGI installation problem



Hi,

One option would simply be to remove make_edi from Makefile.am. 
Unfortunately this tool has proven to be a bit buggy in the compile 
stage, and you won't need it for any normal simulations.

The other fix would be to create separate static variables to use in 
the list for reading options, and assembling then into evStepOptions[] 
after the fact.

Cheers,

Erik

On Mar 16, 2008, at 11:42 AM, Siavoush Dastmalchi wrote:

> Hi there,
> Now I am getting the following error. I can see that others had this 
> problem before and there are couple of solutions in the archive 
> suggested by the list. I was wondering which one should I consider. 
> Some suggestions apparently didn't work, but others , I am not sure.
> Many thanks,
> Siavoush
>
> cc-1028 cc: ERROR File = make_edi.c, Line = 579
>  The expression used must have a constant value.
>
>      { evStepOptions[evLINFIX], FALSE, etSTR, {&evParams[evLINFIX]},
>        ^
>
> cc-1028 cc: ERROR File = make_edi.c, Line = 581
>  The expression used must have a constant value.
>
>      { evStepOptions[evLINACC], FALSE, etSTR, {&evParams[evLINACC]},
>        ^
>
> cc-1028 cc: ERROR File = make_edi.c, Line = 583
>  The expression used must have a constant value.
>
>      { evStepOptions[evRADFIX], FALSE, etREAL, {&radfix},
>        ^
>
> cc-1552 cc: WARNING File = make_edi.c, Line = 622
>  The variable "bTop" is set but never used.
>
>      bool bTop, bM, bFit1;
>           ^
>
> 3 errors detected in the compilation of "make_edi.c".
> *** Error code 2 (bu21)
> *** Error code 1 (bu21)
> *** Error code 1 (bu21)
>
>
> ________________________________
>
> From: gmx-users-bounces at gromacs.org on behalf of David van der Spoel
> Sent: Sun 2008/03/16 11:30 ق.ظ
> To: Discussion list for GROMACS users
> Subject: Re: [gmx-users] SGI installation problem
>
>
>
> Siavoush Dastmalchi wrote:
>> Hi,
>>
>> Thanks to David for his suggestion. Now I have the following error. 
>> It is a bit of shame that I am hassling you, but I want GMX to work 
>> on my sgi.
>>
>>
>>
>> Cheers, Siavoush
>>
>>
>>
>> Here is the error message:
>>
>> gmx_spatial.c -Wp,-MDupdate,.deps/gmx_spatial.TPlo -o gmx_spatial.o
>> cc-1028 cc: ERROR File = gmx_spatial.c, Line = 110
>>  The expression used must have a constant value.
>>      { "-pbc",      bPBC, etBOOL, {&bPBC},
>>                     ^
>> cc-1028 cc: ERROR File = gmx_spatial.c, Line = 112
>>  The expression used must have a constant value.
>>      { "-div",      bCALCDIV, etBOOL, {&bCALCDIV},
>>                     ^
>> cc-1028 cc: ERROR File = gmx_spatial.c, Line = 114
>>  The expression used must have a constant value.
>>      { "-ign",      iIGNOREOUTER, etINT, {&iIGNOREOUTER},
>>                     ^
>> cc-1028 cc: ERROR File = gmx_spatial.c, Line = 118
>>  The expression used must have a constant value.
>>      { "-bin",      rBINWIDTH, etREAL, {&rBINWIDTH},
>>                     ^
>> cc-1028 cc: ERROR File = gmx_spatial.c, Line = 120
>>  The expression used must have a constant value.
>>      { "-nab",      iNAB, etINT, {&iNAB},
>>                     ^
>> 5 errors detected in the compilation of "gmx_spatial.c".
>>
>
> Please replace all of these by FALSE (in capital).
>
> --
> David van der Spoel, Ph.D.
> Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala 
> University.
> Box 596, 75124 Uppsala, Sweden. Phone:  +46184714205. Fax: 
> +4618511755.
> spoel at xray.bmc.uu.se    spoel at gromacs.org   http://folding.bmc.uu.se <http://folding.bmc.uu.se/>  
> <http://folding.bmc.uu.se/>
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before 
> posting!
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
>
>
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before 
> posting!
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
>

_______________________________________________
gmx-users mailing list    gmx-users at gromacs.org
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to gmx-users-request at gromacs.org.
Can't post? Read http://www.gromacs.org/mailing_lists/users.php





More information about the gromacs.org_gmx-users mailing list