[gmx-users] using xmp file

[Florian Dommert]

Mark Abraham wrote:
> pragya chohan wrote:
>> Dear users
>>  
>> I wasted to look at H bonding between between a particular residue
>> and rest of the system. So I did g_hbond. It created a number of
>> files I want to make a table indicating atom of residue
>> participating, atom or residue number of Donor atom, lifetime of
>> those bonds to show their significance.
>>  
>> Can you tell me which files are useful for this purpose? 
>
> Yes, but first you should be reading "g_hbond -h" and working some
> things out for yourself.
>
>> Also please tell me how to visualise xmp files on windows>
>
> Google is probably your friend for finding out about viewers for *xpm*
> files. The GIMP will certainly work, but it's a heavyweight solution!
>
Perhaps the xpm2ps tool will also help to view a ps document, which
should be possible with windows ;)


> Mark
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-- 
Florian Dommert
Dipl.-Phys.

Computational and Theoretical Softmatter & Biophysics group

Frankfurt Institute for Advanced Studies
Johann-Wolfgang-Goethe University

Ruth-Moufang-Str. 1
60438 Frankfurt am Main

Phone: +49(0)69 / 798 - 47522
Fax:   +49(0)69 / 798 - 47611

EMail: dommert at fias.uni-frankfurt.de
Home: http://fias.uni-frankfurt.de/~simbio/Florian_Dommert

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