[gmx-users] using xmp file

Florian Dommert dommert at fias.uni-frankfurt.de
Sat May 3 02:06:52 CEST 2008


Mark Abraham wrote:
> pragya chohan wrote:
>> Dear users
>>  
>> I wasted to look at H bonding between between a particular residue
>> and rest of the system. So I did g_hbond. It created a number of
>> files I want to make a table indicating atom of residue
>> participating, atom or residue number of Donor atom, lifetime of
>> those bonds to show their significance.
>>  
>> Can you tell me which files are useful for this purpose? 
>
> Yes, but first you should be reading "g_hbond -h" and working some
> things out for yourself.
>
>> Also please tell me how to visualise xmp files on windows>
>
> Google is probably your friend for finding out about viewers for *xpm*
> files. The GIMP will certainly work, but it's a heavyweight solution!
>
Perhaps the xpm2ps tool will also help to view a ps document, which
should be possible with windows ;)


> Mark
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before
> posting!
> Please don't post (un)subscribe requests to the list. Use the www
> interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
>


-- 
Florian Dommert
Dipl.-Phys.

Computational and Theoretical Softmatter & Biophysics group

Frankfurt Institute for Advanced Studies
Johann-Wolfgang-Goethe University

Ruth-Moufang-Str. 1
60438 Frankfurt am Main

Phone: +49(0)69 / 798 - 47522
Fax:   +49(0)69 / 798 - 47611

EMail: dommert at fias.uni-frankfurt.de
Home: http://fias.uni-frankfurt.de/~simbio/Florian_Dommert

-------------- next part --------------
A non-text attachment was scrubbed...
Name: dommert.vcf
Type: text/x-vcard
Size: 138 bytes
Desc: not available
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20080503/6e409063/attachment.vcf>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: signature.asc
Type: application/pgp-signature
Size: 252 bytes
Desc: OpenPGP digital signature
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20080503/6e409063/attachment.sig>


More information about the gromacs.org_gmx-users mailing list