[gmx-users] how to edit pdb file

andrea spitaleri spitaleri.andrea at hsr.it
Wed May 21 16:41:55 CEST 2008


Hi,
have look to this:

http://stein.bioch.dundee.ac.uk/~charlie/software/pdb-mode/pdb-mode.html

I found it very useful

regards

andrea

Wei, Xiupeng wrote:
> Dear GMX users,
>          I have a basic question. I want to put two same box in x direction. So I need increase the number of atoms and change their x coordinates,then combine it with the original one. But the file created by Excel can't be recoganized by gromacs. Is there any method in Gromacs to handle that? I also used Matlab, but it can't read pdb file correctly. Thanks.
> 
> Best regards,
> xiupeng
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-- 
-------------------------------
Andrea Spitaleri PhD
Dulbecco Telethon Institute
c/o DIBIT Scientific Institute
Biomolecular NMR, 1B4
Via Olgettina 58
20132 Milano (Italy)
http://biomolecularnmr.ihsr.dom/
Tel: 0039-0226434348/5622/3497/4922
Fax: 0039-0226434153
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