[gmx-users] how to write .top file for a rigid molecule
Jinyao Wang
wangjy at ciac.jl.cn
Wed Nov 12 04:25:48 CET 2008
gmx-users,
I am goning to carry out a rigid system system simulation for Benzaldehyde. Atom charges,Bonds and Angles come from Gaussion03 computation. LJ interaction parameters come from oplsaa forcefield. I don't know how to deal with rigid molecules in gromacs. So I couldnot know how to write the .top file for the rigid Benzaldehyde. If you could give me some suggest, It is appreciated.
Jinyao Wang
wangjy at ciac.jl.cn
2008-11-12
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