[gmx-users] Unable to view trajectory in pymol or vmd

[vivek sharma]

Hi There,

I have few MD trajectory, I want to analyze them visually (other than ngmx
option as it gives very few option).
I tried for opening those trajectories in vmd and pymol but not able to view
them. It shows me the trajectory loaded, but not viewing anything.
Is there any check to be doen for viewing trajectory in these visualization
tools ?

Or is it because of the size of the trajectory as I am having trajectories
of around 10 nsec.

Please suggest.

With Thanks,
Vivek
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