[gmx-users] gromacs
He, Yang
yang.he at mavs.uta.edu
Tue Oct 14 20:47:38 CEST 2008
Hi all users,
I juse encountered a problem when I run the code about the course grain for DNA,
it shows like this
creating statusfile for 1 node...
Back Off! I just backed up mdout.mdp to ./#mdout.mdp.1#
checking input for internal consistency...
calling cpp...
In file included from ffyxh.itp:8,
from hust.top:11:
ffyxhnb.itp:25:61: warning: no newline at end of file
In file included from ffyxh.itp:9,
from hust.top:11:
ffyxhbon.itp:26:5: warning: no newline at end of file
In file included from hust.top:65:
ffyxh.atp:6:34: warning: no newline at end of file
hust.top:76:17: warning: no newline at end of file
processing topology...
Generated 32 of the 36 non-bonded parameter combinations
-------------------------------------------------------
Program grompp, VERSION 3.3.1
Source code file: toputil.c, line: 61
Fatal error:
Atomtype 'OW' not found!
I have tried to solve that , but it did not still work . So anyone of you can tell me how to solve that.
Thank you in advance.
Yang
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