[gmx-users] mdrun doesn't run in version 4.0 on sgi server

[Mark Abraham]

Lee Soin wrote:
> Hello!
> I'm using gromacs 4.0 on an sgi server. Everything compiled OK. Every 
> program in gromacs runs OK, except mdrun. Mdrun stops every time at this 
> point:
>  
> Loaded with Money
> starting mdrun 'IMMUNOGLOBULIN G BINDING PROTEIN G in water'
> 100000 steps,    200.0 ps.
> 
> Then nothing happens.The CPU usage is 0%, and the .trr and .xtc files 
> remain 0 bytes. What is the problem?

What does the log file say? Are you running in parallel? If so, how? Do 
other parallel codes work?

Mark