[gmx-users] density graph ( density vs time)

hhhh huan scottiehuan at yahoo.com
Tue Oct 28 16:43:39 CET 2008


I used g_energy before but i just obtained density (y-axis) versus box length (x axis). now i wish to obtain density vs time

thanks

--- On Tue, 10/28/08, Justin A. Lemkul <jalemkul at vt.edu> wrote:

> From: Justin A. Lemkul <jalemkul at vt.edu>
> Subject: Re: [gmx-users] density graph ( density vs time)
> To: scottiehuan at yahoo.com, "Discussion list for GROMACS users" <gmx-users at gromacs.org>
> Date: Tuesday, October 28, 2008, 11:31 PM
> hhhh huan wrote:
> > Dear all, 
> > 
> > Previously i obtained a density (y-axis) versus box
> length (x axis) using g_density..
> > 
> > So now i wonder is it there is another way that we can
> use other way to obtain a density (y axis) versus time
> length (x-axis).
> > 
> 
> Use g_energy.
> 
> -Justin
> 
> > Thanks..
> > 
> > 
> > --- On Tue, 10/28/08, Mark Abraham
> <Mark.Abraham at anu.edu.au> wrote:
> > 
> >> From: Mark Abraham <Mark.Abraham at anu.edu.au>
> >> Subject: Re: [gmx-users] density graph ( density
> vs time)
> >> To: "Discussion list for GROMACS users"
> <gmx-users at gromacs.org>
> >> Date: Tuesday, October 28, 2008, 4:46 PM
> >> hhhh huan wrote:
> >>> Dear all gmx-users and developers.
> >>>
> >>> I wish to get a density graph with density
> versus time
> >> instead of nm, so how can i obtained this?
> >>
> >> Please ask a more specific question. We can't
> tell
> >> whether your problem 
> >> is knowing what tool to use, how to use it, how to
> label
> >> axes of plots 
> >> or something else.
> >>
> >> Mark
> >> _______________________________________________
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> > 
> > 
> >       
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> 
> -- 
> ========================================
> 
> Justin A. Lemkul
> Graduate Research Assistant
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
> 
> ========================================


      



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