[gmx-users] density graph ( density vs time)

Jochen Hub jhub at gwdg.de
Tue Oct 28 16:57:54 CET 2008




hhhh huan wrote:
> I used g_energy before but i just obtained density (y-axis) versus box
length (x axis).



hhhh huan wrote:
> Previously i obtained a density (y-axis) versus box length (x axis)
using g_density..


Sounds like a contradition to me... :-)





> 
> thanks
> 
> --- On Tue, 10/28/08, Justin A. Lemkul <jalemkul at vt.edu> wrote:
> 
>> From: Justin A. Lemkul <jalemkul at vt.edu>
>> Subject: Re: [gmx-users] density graph ( density vs time)
>> To: scottiehuan at yahoo.com, "Discussion list for GROMACS users" <gmx-users at gromacs.org>
>> Date: Tuesday, October 28, 2008, 11:31 PM
>> hhhh huan wrote:
>>> Dear all, 
>>>
>>> Previously i obtained a density (y-axis) versus box
>> length (x axis) using g_density..
>>> So now i wonder is it there is another way that we can
>> use other way to obtain a density (y axis) versus time
>> length (x-axis).
>> Use g_energy.
>>
>> -Justin
>>
>>> Thanks..
>>>
>>>
>>> --- On Tue, 10/28/08, Mark Abraham
>> <Mark.Abraham at anu.edu.au> wrote:
>>>> From: Mark Abraham <Mark.Abraham at anu.edu.au>
>>>> Subject: Re: [gmx-users] density graph ( density
>> vs time)
>>>> To: "Discussion list for GROMACS users"
>> <gmx-users at gromacs.org>
>>>> Date: Tuesday, October 28, 2008, 4:46 PM
>>>> hhhh huan wrote:
>>>>> Dear all gmx-users and developers.
>>>>>
>>>>> I wish to get a density graph with density
>> versus time
>>>> instead of nm, so how can i obtained this?
>>>>
>>>> Please ask a more specific question. We can't
>> tell
>>>> whether your problem 
>>>> is knowing what tool to use, how to use it, how to
>> label
>>>> axes of plots 
>>>> or something else.
>>>>
>>>> Mark
>>>> _______________________________________________
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>>>
>>>       
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>> -- 
>> ========================================
>>
>> Justin A. Lemkul
>> Graduate Research Assistant
>> Department of Biochemistry
>> Virginia Tech
>> Blacksburg, VA
>> jalemkul[at]vt.edu | (540) 231-9080
>> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>>
>> ========================================
> 
> 
>       
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-- 
************************************************
Dr. Jochen Hub
Max Planck Institute for Biophysical Chemistry
Computational biomolecular dynamics group
Am Fassberg 11
D-37077 Goettingen, Germany
Email: jhub[at]gwdg.de
Tel.: +49 (0)551 201-2312
************************************************



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