[gmx-users] How to convert gromacs traj file(.xtc) to amber traj file?

Omer Markovitch omermar at gmail.com
Tue Sep 9 08:33:43 CEST 2008

Are you sure this will be done automaticaly if you'll procide gromacs with
an output file called filename.trj?
There is also the option of converting into PDB: "trjconv -f traj.xtc -o
trajtraj.pdb -s coordinates.gro".

Koby Levy research group,
Weizmann Institute of Science.

On Mon, Sep 8, 2008 at 20:14, ranqi zhu <zhuranqi at msn.com> wrote:

> Hi, Everyone,
> I just want to use the clustering tool in amber which only take trj file.
> Thanks
> -Ranqi
> ------------------------------
> Want to do more with Windows Live? Learn "10 hidden secrets" from Jamie. Learn
> Now<http://windowslive.com/connect/post/jamiethomson.spaces.live.com-Blog-cns!550F681DAD532637!5295.entry?ocid=TXT_TAGLM_WL_domore_092008>
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20080909/0cd571ee/attachment.html>

More information about the gromacs.org_gmx-users mailing list