[gmx-users] to add counter ions based on potential

Justin A. Lemkul jalemkul at vt.edu
Fri Sep 12 15:22:28 CEST 2008



sarbani chattopadhyay wrote:
>  
> Hi everybody,
>                     I want to add counter ions based on potential and 
> not randomly.
> I will be very grateful if anyone can guide me through the command 
> "genion" for this.
> 
> I tried with "-random no" but it didn't work.

According to genion -h, you should use genion -norandom

-Justin

> 
> Thanks in advance
> Sarbani
> 
> 
> 
> IN 
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> 
> 
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-- 
========================================

Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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