[gmx-users] to add counter ions based on potential

Jochen Hub jhub at gwdg.de
Fri Sep 12 15:25:38 CEST 2008

sarbani chattopadhyay wrote:
> Hi everybody,
>                     I want to add counter ions based on potential and not randomly.
> I will be very grateful if anyone can guide me through the command "genion" for this.

As far as I know, that has not been implemented yet. It is a good idea,


> I tried with "-random no" but it didn't work.
> Thanks in advance
> Sarbani
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Dr. Jochen Hub
Max Planck Institute for Biophysical Chemistry
Computational biomolecular dynamics group
Am Fassberg 11
D-37077 Goettingen, Germany
Email: jhub[at]gwdg.de
Tel.: +49 (0)551 201-2312

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