[gmx-users] pairing error

mohit kumar sahajmohit at gmail.com
Thu Aug 6 22:10:27 CEST 2009


but i dnt find any 'type' column in my topology file..the grompp programm
with this top file works gud in 3.3 version..im having 4.0.5 version..is
that can be issue?? shud i try in 3.3 version

On Thu, Aug 6, 2009 at 2:48 PM, Justin A. Lemkul <jalemkul at vt.edu> wrote:

>
>
> mohit kumar wrote:
>
>> im running energy minimization for POPC bilayer but its showing error
>> which i cant figure out
>>
>> -- -------------------------------------------------------
>> Program grompp, VERSION 4.0.5
>> Source code file: topdirs.c, line: 99
>>
>> Fatal error:
>> Invalid pairs type 0
>>
>> what does this pair type mean and how can i solve it?? plz help me
>>
>>
> The error message is pretty clear.  Somewhere within the topology, you have
> a "0" in the "type" column, which doesn't correspond to any known pair type.
>
> -Justin
>
>
>>
>> MOHIT KUMAR
>> Molecular Biochemistry & Biophysics
>> Graduate Student
>> Illinois Institute of Technology
>> Chicago,IL, USA
>>
>>
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>>
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>
> --
> ========================================
>
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>
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-- 
MOHIT KUMAR
Molecular Biochemistry & Biophysics
Graduate Student
Illinois Institute of Technology
Chicago,IL, USA
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