[gmx-users] Error: MPI Error

[Carsten Kutzner]

On Aug 11, 2009, at 11:52 AM, BSV Ramesh wrote:

>
>
> -- Dear All,
>  I am getting the following error:
> Killed by signal 2
> Killed by signal 2
> Killed by signal 2
> Killed by signal 2
> Killed by signal 2
> Killed by signal 2
> Killed by signal 2
> Killed by signal 2
>     .
>     .
>     .
>     .
> Killed by signal 2
>
> , when i am submitting a job with GROMACS (using MPIRUN )using PBS  
> in our cluster, We have 16 node Oscar Cluster job is successfully  
> running in a single node,but jobs are not span to multiple nodes(i,e  
> not more than 2 processors).so request you to please provide us a  
> valuable suggestions and solution.

Please provide relevant information. What MPI are you using? How does
the job file look like?
Try to submit a simple MPI test job on multiple nodes first. When that
works, proceed to an mdrun job.

Carsten