[gmx-users] Re: solvation

Tsjerk Wassenaar tsjerkw at gmail.com
Thu Aug 13 21:24:57 CEST 2009


> Thanks for the answer. When I said far away means my pore was in one corner
> of vmd window and the water molecules in opposite corner (almost).

Did I miss something or did neither Vitaly nor Justin reply "Are you
perhaps seeing the effect of periodic boundary conditions?".


Tsjerk A. Wassenaar, Ph.D.
Junior UD (post-doc)
Biomolecular NMR, Bijvoet Center
Utrecht University
Padualaan 8
3584 CH Utrecht
The Netherlands
P: +31-30-2539931
F: +31-30-2537623

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