[gmx-users] error in Deuterium order analysis

Justin A. Lemkul jalemkul at vt.edu
Mon Aug 31 15:55:27 CEST 2009

Samik Bhattacharya wrote:
> hi all, i am analyzing a trajectory of a membrane protein embedded in 
> DMPC bilayer. for this i'm using deuterium order analysis where i have 
> created two different index groups for the acyl chains. now when i am 
> running g_order its giving an error message like
> Program g_order, VERSION 4.0.5
> Source code file: gmx_order.c, line: 362
> Fatal error:
> grp 1 does not have same number of elements as grp 1
> can anybody tell me where this kind of error generating from? and how to 
> solve this problem? is there any problem in the index group creation? a 
> little help would be very encouraging....

Yes, your index groups are wrong.  There is a step-by-step how-to on the wiki:



> Thanking You all
> Shamik
> ------------------------------------------------------------------------
> Love Cricket? Check out live scores, photos, video highlights and more. 
> Click here 
> <http://in.rd.yahoo.com/tagline_cricket_2/*http://cricket.yahoo.com>.
> ------------------------------------------------------------------------
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php


Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


More information about the gromacs.org_gmx-users mailing list