karami.leila1 at gmail.com
Wed Dec 9 12:49:24 CET 2009
I used command : [g_confrms -f1 initial.gro -f2 final.gro -n1 1.ndx -n2
2.ndx -o fit.pdb] to obtain superimposed structure of initial and final
structures. I saw fit.pdb file by vmd but fit.pdb obtained was very
mixed,busy and unclear.
is my manner true? is there other method for this purpose?
Any help will highly appreciated!
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