[gmx-users] Pull Peptide Apart

Joseph Johnson helstreak at hotmail.com
Mon Feb 9 22:23:17 CET 2009

Hello All,

I'm fairly new to GROMACS so I apologize for if the question is simple.

I have a small peptide that I would like to pull apart.  What is the 
process for doing this?  What type of things should I be reading into?  
Is there any tutorials or code already for such a process?  I've seen 
some things on freeze groups and accelerated groups and some on AFM 
pulling but I'm confused as to where to start.

Any advice would be helpful.  Thanks  :) 

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