February 2009 Archives by subject
Starting: Sun Feb 1 10:48:20 CET 2009
Ending: Sat Feb 28 19:53:10 CET 2009
Messages: 711
- [gmx-users] (no subject)
Sunil Thapa
- [gmx-users] (no subject)
Mark Abraham
- [gmx-users] (no subject)
Sunil Thapa
- [gmx-users] (no subject)
Justin A. Lemkul
- [gmx-users] (no subject)
sharada
- [gmx-users] (no subject)
Nuno Azoia
- [gmx-users] (no subject)
He, Yang
- [gmx-users] (no subject)
Q. Y. HUAN
- [gmx-users] .mdp file for polymer
varsha gautham
- [gmx-users] .mdp file for polymer
Mark Abraham
- [gmx-users] .mdp file for polymer
varsha gautham
- [gmx-users] .mdp file for polymer
Mark Abraham
- [gmx-users] .mdp file for polymer
Berk Hess
- [gmx-users] .mdp file for polymer
Berk Hess
- [gmx-users] 3Dplot
Alessandro Casoni
- [gmx-users] 3Dplot
David van der Spoel
- [gmx-users] 3Dplot
Alessandro Casoni
- [gmx-users] 4.0.3 goes off into la la land .... infinite loop
Dallas B. Warren
- [gmx-users] 4.0.3 goes off into la la land .... infinite loop
Mark Abraham
- [gmx-users] 4.0.3 goes off into la la land .... infinite loop
Dallas B. Warren
- [gmx-users] 4.0.3 goes off into la la land .... infinite loop
Dallas B. Warren
- [gmx-users] about dumping the last frame
Shirin Awasthi
- [gmx-users] about dumping the last frame
nahren manuel
- [gmx-users] about dumping the last frame
Tsjerk Wassenaar
- [gmx-users] about g_wham
Jochen Hub
- [gmx-users] About position restraint specification
Lee Soin
- [gmx-users] About position restraint specification
Justin A. Lemkul
- [gmx-users] About position restraint specification
Lee Soin
- [gmx-users] About position restraint specification
Justin A. Lemkul
- [gmx-users] About the binary identical continuation by restarting from the checkpoint file
GuoGuangjun
- [gmx-users] About the binary identical continuation by restarting from the checkpoint file
Berk Hess
- [gmx-users] About the binary identical continuation by restarting from the checkpoint file
GuoGuangjun
- [gmx-users] About the binary identical continuation by restarting from the checkpoint file
Mark Abraham
- [gmx-users] About the binary identical continuation by restarting from the checkpoint file
Berk Hess
- [gmx-users] About the binary identical continuation by restarting from the checkpoint file
Mark Abraham
- [gmx-users] About the binary identical continuation by restarting from the checkpoint file
GuoGuangjun
- [gmx-users] about the repelling of DNA base pair
He, Yang
- [gmx-users] about the repelling of DNA base pair
Mark Abraham
- [gmx-users] about the repelling of DNA base pair
Justin A. Lemkul
- [gmx-users] about the repelling of DNA base pair
He, Yang
- [gmx-users] about the repelling of DNA base pair
Justin A. Lemkul
- [gmx-users] Advice for simulating small DNA
Joshua Ballanco
- [gmx-users] Advice for simulating small DNA
Mark Abraham
- [gmx-users] Advice for simulating small DNA
Joshua Ballanco
- [gmx-users] Advice for simulating small DNA
Justin A. Lemkul
- [gmx-users] Advice for simulating small DNA
Mark Abraham
- [gmx-users] Advice for simulating small DNA
Joshua Ballanco
- [gmx-users] Advice for simulating small DNA
Justin A. Lemkul
- [gmx-users] Advice for simulating small DNA
Mark Abraham
- [gmx-users] Advice for simulating small DNA
Joshua Ballanco
- [gmx-users] Advice for simulating small DNA
Mark Abraham
- [gmx-users] akalabya bissoyi has invited you to open a Google mail account
akalabya bissoyi
- [gmx-users] analysis using Gromacs tools
chris.neale at utoronto.ca
- [gmx-users] analysis using Gromacs tools
Mark Abraham
- [gmx-users] analysis using Gromacs tools
oguz gurbulak
- [gmx-users] analysis using Gromacs tools
Adrien Delmont
- [gmx-users] analyzing beta factor
özge kül
- [gmx-users] analyzing beta factor
David van der Spoel
- [gmx-users] analyzing beta factor
özge kül
- [gmx-users] analyzing beta factor
David van der Spoel
- [gmx-users] analyzing beta factor
Martyn Winn
- [gmx-users] analyzing beta factor
David van der Spoel
- [gmx-users] analyzing beta factor
Martyn Winn
- [gmx-users] anomalous free energy dgdl.xvg values every nstlist steps while using a twin-range cutoff
Berk Hess
- [gmx-users] anomalous free energy dgdl.xvg values every nstlist steps while using a twin-range cutoff
chris.neale at utoronto.ca
- [gmx-users] anomalous free energy dgdl.xvg values every nstlist steps while using a twin-range cutoff
Berk Hess
- [gmx-users] anomalous free energy dgdl.xvg values every nstlist steps while using a twin-range cutoff
Chris Neale
- [gmx-users] Atom H2 not found in rtp
varsha gautham
- [gmx-users] Atom H2 not found in rtp
Tsjerk Wassenaar
- [gmx-users] Atom index overflow after adding water
Peggy Yao
- [gmx-users] Atom index overflow after adding water
Justin A. Lemkul
- [gmx-users] Atom index overflow after adding water
Peggy Yao
- [gmx-users] Atom index overflow after adding water
Mark Abraham
- [gmx-users] Atom index overflow after adding water
Peggy Yao
- [gmx-users] Atom index overflow after adding water
Justin A. Lemkul
- [gmx-users] Atom index overflow after adding water
Peggy Yao
- [gmx-users] atomtype OWT4 not found but OWT3 and OWT5 is ok in amber03 force field....how is that possible?
drugdesign
- [gmx-users] Barostat & Density decreasing to zero
Omer Markovitch
- [gmx-users] Barostat & Density decreasing to zero
Ran Friedman
- [gmx-users] Benchmarks for 4.0.X
Dallas B. Warren
- [gmx-users] Re: Benchmarks for 4.0.X
Dallas B. Warren
- [gmx-users] RE: Benchmarks for 4.0.X
Dallas B. Warren
- [gmx-users] buckingham & pairs
Luca De Gaetani
- [gmx-users] buffer reading error with grompp
Nicolas
- [gmx-users] Bug with system total charge?
DimitryASuplatov
- [gmx-users] RE:Bug with system total charge?
DimitryASuplatov
- [gmx-users] C-terminal amide capping
ANINDITA GAYEN
- [gmx-users] C-terminal amide capping
Justin A. Lemkul
- [gmx-users] C-terminal amide capping
pedro alberto valiente flores
- [gmx-users] Cannot obtain the expected pressure using the Parrinello-Rahman coupling in a gas-liquid system
Justin A. Lemkul
- [gmx-users] Cannot obtain the expected pressure using the Parrinello-Rahman coupling in a gas-liquid system
Justin A. Lemkul
- [gmx-users] Cannot obtain the expected pressure using the Parrinello-Rahman coupling in a gas-liquid system
David van der Spoel
- [gmx-users] Cannot obtain the expected pressure using the Parrinello-Rahman coupling in a gas-liquid system
Justin A. Lemkul
- [gmx-users] Cannot obtain the expected pressure using the Parrinello-Rahman coupling in a gas-liquid system
GuoGuangjun
- [gmx-users] Cannot obtain the expected pressure using the Parrinello-Rahman coupling in a gas-liquid system
Berk Hess
- [gmx-users] Cannot obtain the expected pressure using the Parrinello-Rahman coupling in a gas-liquid system
GuoGuangjun
- [gmx-users] Cannot obtain the expected pressure using the Parrinello-Rahman coupling in a gas-liquid system
GuoGuangjun
- [gmx-users] capping in c terminal
shahrbanoo karbalaee
- [gmx-users] capping in c terminal
Mark Abraham
- [gmx-users] cCntinue running in Gromacs 4.0
xuji
- [gmx-users] CG
dota
- [gmx-users] CG
doty alexiou
- [gmx-users] CG
Justin A. Lemkul
- [gmx-users] checkpoint
jayant james
- [gmx-users] checkpoint
Justin A. Lemkul
- [gmx-users] Re: Chris
Jinyao Wang
- [gmx-users] COM motion removal
Mark Abraham
- [gmx-users] combination rules
Shuangxing Dai
- [gmx-users] combination rules
Justin A. Lemkul
- [gmx-users] combination rules -- the part aboutthe combinationrules
Shuangxing Dai
- [gmx-users] combination rules -- the part aboutthe combinationrules
Berk Hess
- [gmx-users] combination rules -- the part aboutthecombinationrules
Shuangxing Dai
- [gmx-users] combination rules -- the part aboutthecombinationrules
Mark Abraham
- [gmx-users] combination rules -- the part about the combinationrules
Mark Abraham
- [gmx-users] combination rules -- the part about the combinationrules
Shuangxing Dai
- [gmx-users] combination rules -- the part about the combination rules
chris.neale at utoronto.ca
- [gmx-users] combination rules -- the part about the combination rules
Berk Hess
- [gmx-users] combination rules -- the part aboutthecombinationrules
Shuangxing Dai
- [gmx-users] combination rules -- the part aboutthecombinationrules
Mark Abraham
- [gmx-users] combination rules -- the part aboutthecombinationrules
Berk Hess
- [gmx-users] constructing polymer.itp files from monomer files obtained from prodrg server
varsha gautham
- [gmx-users] constructing polymer.itp files from monomer files obtained from prodrg server
Justin A. Lemkul
- [gmx-users] Continuation of Runs and Checkpoint File Use
Dallas B. Warren
- [gmx-users] RE: Continuation of Runs and Checkpoint File Use
Dallas B. Warren
- [gmx-users] Continue running in Gromacs 4.0
xuji
- [gmx-users] Continue running in Gromacs 4.0
Mark Abraham
- [gmx-users] Continuous polymer chain?
Joshua Ballanco
- [gmx-users] Continuous polymer chain?
Justin A. Lemkul
- [gmx-users] Continuous polymer chain?
David van der Spoel
- [gmx-users] Continuous polymer chain?
Joshua Ballanco
- [gmx-users] Conversion of trajectories to netcdf format
Tobias Unruh
- [gmx-users] Conversion of trajectories to netcdf format
Ran Friedman
- [gmx-users] density_SW_model
Sang-Min Park
- [gmx-users] density_SW_model
David van der Spoel
- [gmx-users] density_SW_model
Sang-Min Park
- [gmx-users] density_SW_model
David van der Spoel
- [gmx-users] density_SW_model
Sang-Min Park
- [gmx-users] Difference between command pdb2gmx and pdb2gmx_d
Peggy Yao
- [gmx-users] Difference between command pdb2gmx and pdb2gmx_d
Justin A. Lemkul
- [gmx-users] Difference between command pdb2gmx and pdb2gmx_d
pedro alberto valiente flores
- [gmx-users] Difference between command pdb2gmx and pdb2gmx_d
Dallas B. Warren
- [gmx-users] DOPC + Cholesterol topology and forcefield files
Hari Shankar M
- [gmx-users] energy and coordinates at different times
Robert Fenwick
- [gmx-users] energy and coordinates at different times
Justin A. Lemkul
- [gmx-users] energy file
jayant james
- [gmx-users] energy file
Mark Abraham
- [gmx-users] energy file
jayant james
- [gmx-users] energy file
Justin A. Lemkul
- [gmx-users] energy groups
Liu Shiyong
- [gmx-users] energy groups
Justin A. Lemkul
- [gmx-users] energy groups
Liu Shiyong
- [gmx-users] energy groups
Justin A. Lemkul
- [gmx-users] energy groups
Liu Shiyong
- [gmx-users] energy groups
Justin A. Lemkul
- [gmx-users] energy groups
Liu Shiyong
- [gmx-users] energy groups
Justin A. Lemkul
- [gmx-users] energy groups
Mark Abraham
- [gmx-users] energy groups
Liu Shiyong
- [gmx-users] energy groups
Justin A. Lemkul
- [gmx-users] energy groups
Mark Abraham
- [gmx-users] energy minimization
Q. Y. HUAN
- [gmx-users] energy minimization with 4 nodes
Q. Y. HUAN
- [gmx-users] energy minimization with 4 nodes
Mark Abraham
- [gmx-users] energy minimization with 4 nodes
Q. Y. HUAN
- [gmx-users] Error after Mdrun
Nikit sharan
- [gmx-users] Error after Mdrun
Mark Abraham
- [gmx-users] ewald_rtol parameter question
Claus Valka
- [gmx-users] ewald_rtol parameter question
Claus Valka
- [gmx-users] ewald_rtol parameter question
Mark Abraham
- [gmx-users] ewald_rtol parameter question
Berk Hess
- [gmx-users] extrnal itp files
bhf70
- [gmx-users] extrnal itp files
Mark Abraham
- [gmx-users] extrnal itp files
bhf70
- [gmx-users] extrnal itp files
XAvier Periole
- [gmx-users] Fatal error: Could only find a forcefield type for 106 out of 270 atoms
David van der Spoel
- [gmx-users] Fatal error: Could only find a forcefield type for 106 out of 270 atoms
darrellk at ece.ubc.ca
- [gmx-users] ffG43a1bon.itp: how to add new bond type in ffG43a1bon.itp
Mark Abraham
- [gmx-users] ffG43a1bon.itp: how to add new bond type in ffG43a1bon.itp
anoop dimri
- [gmx-users] ffgmx43a1 for use with lipids
Sumamohan S
- [gmx-users] ffgmx43a1 for use with lipids
Mark Abraham
- [gmx-users] ffgmx43a1 for use with lipids
Sumamohan S
- [gmx-users] ffgmx43a1 for use with lipids
Mark Abraham
- [gmx-users] finite element methods
Sagittarius
- [gmx-users] finite element methods
Mark Abraham
- [gmx-users] Formating PDB Files
Jack Shultz
- [gmx-users] Formating PDB Files
Justin A. Lemkul
- [gmx-users] free energy decomposition
friendli
- [gmx-users] free energy decomposition
Berk Hess
- [gmx-users] Free energy perturbation of Cu(I) binding
Polavarapu, Abhigna
- [gmx-users] Free energy perturbation of Cu(I) binding
David Mobley
- [gmx-users] Free energy perturbation of Cu(I) binding
abhigna polavarapu
- [gmx-users] Free energy perturbation of Cu(I) binding
Mark Abraham
- [gmx-users] Free energy perturbation of Cu(I) binding
abhigna polavarapu
- [gmx-users] Free energy perturbation of Cu(I) binding
Mark Abraham
- [gmx-users] Free energy perturbation of Cu(I) binding
abhigna polavarapu
- [gmx-users] Free energy perturbation of Cu(I) binding
Mark Abraham
- [gmx-users] Free energy perturbation of Cu(I) binding
chris.neale at utoronto.ca
- [gmx-users] Free energy perturbation of Cu(I) binding
David Mobley
- [gmx-users] Free energy perturbation of Cu(I) binding
abhigna polavarapu
- [gmx-users] free energy with TIP4P bug fixed
Chris Neale
- [gmx-users] free energy with TIP4P bug fixed
Berk Hess
- [gmx-users] free energy with TIP4P bug fixed
bharat v. adkar
- [gmx-users] funny zero-step mdrun results in 4.0.3
David Mobley
- [gmx-users] funny zero-step mdrun results in 4.0.3
David van der Spoel
- [gmx-users] funny zero-step mdrun results in 4.0.3
David Mobley
- [gmx-users] funny zero-step mdrun results in 4.0.3
Berk Hess
- [gmx-users] funny zero-step mdrun results in 4.0.3
Berk Hess
- [gmx-users] funny zero-step mdrun results in 4.0.3
Berk Hess
- [gmx-users] funny zero-step mdrun results in 4.0.3
Berk Hess
- [gmx-users] funny zero-step mdrun results in 4.0.3
David Mobley
- [gmx-users] g_density for a centain slice
li jianguo
- [gmx-users] g_hbond angle def
rob yang
- [gmx-users] g_hbond angle def
David van der Spoel
- [gmx-users] g_hbond angle def
rob yang
- [gmx-users] g_hbond angle def
David van der Spoel
- [gmx-users] g_hbond angle def
rob yang
- [gmx-users] g_hbond problem to select donor atoms in drug
geeta kant
- [gmx-users] g_hbond problem to select donor atoms in drug
Mark Abraham
- [gmx-users] g_hbond problem to select donor atoms in drug
David van der Spoel
- [gmx-users] g_mdmat
rob yang
- [gmx-users] g_rdf for 2D problem
Xinghua Shi
- [gmx-users] g_sorient -ro output
Laercio Pol Fachin
- [gmx-users] Re:Re: g_spatial and vmd volume slice
Jinyao Wang
- [gmx-users] Re:Re: g_spatial and vmd volume slice
XAvier Periole
- [gmx-users] g_spatial and vmd volume slice
Chris Neale
- [gmx-users] g_spatial and vmd volume slice
Chris Neale
- [gmx-users] g_spatial and vmd volume slice
XAvier Periole
- [gmx-users] g_spatial and vmd volume slice
chris.neale at utoronto.ca
- [gmx-users] g_spatial and vmd volume slice (was "chris")
chris.neale at utoronto.ca
- [gmx-users] g_vellac in the last versions
Vitaly Chaban
- [gmx-users] g_wham Error bars
Raphael Alhadeff
- [gmx-users] g_wham Error bars
Nicolas
- [gmx-users] g_wham Error bars
chris.neale at utoronto.ca
- [gmx-users] g_wham Error bars
Jochen Hub
- [gmx-users] genbox
Sunil Thapa
- [gmx-users] genbox
David van der Spoel
- [gmx-users] Genbox problem with TIP4P water with OPLS
Chao Zhang
- [gmx-users] Genbox problem with TIP4P water with OPLS
Mark Abraham
- [gmx-users] Genbox problem with TIP4P water with OPLS
Chao Zhang
- [gmx-users] Genbox problem with TIP4P water with OPLS
Mark Abraham
- [gmx-users] Genbox problem with TIP4P water with OPLS
Marc F. Lensink
- [gmx-users] Re: gmx-users Digest, Vol 58, Issue 125
akalabya bissoyi
- [gmx-users] Re: gmx-users Digest, Vol 58, Issue 125
Justin A. Lemkul
- [gmx-users] Re: gmx-users Digest, Vol 58, Issue 2
Ms. Aswathy S
- [gmx-users] Re: gmx-users Digest, Vol 58, Issue 2
Mohammed Kamal
- [gmx-users] Re: gmx-users Digest, Vol 58, Issue 31
Prof. Ettore Bismuto
- [gmx-users] Re: gmx-users Digest, Vol 58, Issue 33
Carlo Camilloni
- [gmx-users] Re: gmx-users Digest, Vol 58, Issue 59
Robert Fenwick
- [gmx-users] Re: gmx-users Digest, Vol 58, Issue 59
Justin A. Lemkul
- [gmx-users] Re: gmx-users Digest, Vol 58, Issue 61
Robert Fenwick
- [gmx-users] Gromac 4 support in Chimera
Eric Pettersen
- [gmx-users] gromac running in ubantu 8.10
akalabya bissoyi
- [gmx-users] gromac running in ubantu 8.10
Justin A. Lemkul
- [gmx-users] Gromacs 4.0 Benchmarks
Robert Fenwick
- [gmx-users] Gromacs 4.0 Benchmarks
Justin A. Lemkul
- [gmx-users] gromacs 4.0.3 tests validations
Tru Huynh
- [gmx-users] gromacs 4.0.3 tests validations
Ran Friedman
- [gmx-users] gromacs 4.0.3 tests validations
Tru Huynh
- [gmx-users] gromacs 4.0.3 tests validations
Justin A. Lemkul
- [gmx-users] gromacs 4.0.3 tests validations
David van der Spoel
- [gmx-users] gromacs 4.0.3 tests validations
David van der Spoel
- [gmx-users] gromacs 4.0.4 kernel testing failure x86_64/linux
Tru Huynh
- [gmx-users] Gromacs and MPI
Ricardo Tosta
- [gmx-users] Gromacs and MPI
Justin A. Lemkul
- [gmx-users] Gromacs and ssh problem
Bernhard Knapp
- [gmx-users] Gromacs and ssh problem
Mark Abraham
- [gmx-users] GROMACS Error
Srinivasan Ramachandran
- [gmx-users] GROMACS Error
Justin A. Lemkul
- [gmx-users] gromacs QM/MM
Jacopo Sgrignani
- [gmx-users] gromacs to DLPOLY
ROHIT MALSHE
- [gmx-users] gromacs-4.0.2, parallel performance in two quad core xeon machines
Berk Hess
- [gmx-users] gromacs-4.0.2, parallel performance in two quad core xeon machines
Claus Valka
- [gmx-users] gromacs-4.0.2, parallel performance in two quad core xeon machines
Claus Valka
- [gmx-users] Gromacs-4.0.4 released
Erik Lindahl
- [gmx-users] grompp error
Q. Y. HUAN
- [gmx-users] grompp error
Justin A. Lemkul
- [gmx-users] grompp error
Q. Y. HUAN
- [gmx-users] grompp error
Mark Abraham
- [gmx-users] Re: grompp error- Excluding 3 bonded neighbours-Fatal (Dean Cuebas)
Dean Cuebas
- [gmx-users] Re: grompp error- Excluding 3 bonded neighbours-Fatal (Dean Cuebas)
Mark Abraham
- [gmx-users] Re: grompp error- Excluding 3 bonded neighbours-Fatal error
sanjay23 at iitb.ac.in
- [gmx-users] grompp error- Excluding 3 bonded neighbours-Fatal error
Mark Abraham
- [gmx-users] grompp error- Excluding 3 bonded neighbours-Fatal error
Dean Cuebas
- [gmx-users] heat exchanges
Carlo Camilloni
- [gmx-users] heat exchanges
XAvier Periole
- [gmx-users] heat exchanges
David van der Spoel
- [gmx-users] heat exchanges
Berk Hess
- [gmx-users] heat exchanges
David van der Spoel
- [gmx-users] heat exchanges
XAvier Periole
- [gmx-users] heat exchanges
Berk Hess
- [gmx-users] heat exchanges
XAvier Periole
- [gmx-users] heat exchanges
chris.neale at utoronto.ca
- [gmx-users] heat exchanges
Berk Hess
- [gmx-users] heat exchanges
Chris Neale
- [gmx-users] heat exchanges
Berk Hess
- [gmx-users] Help with apolar solvent box
Ragnarok sdf
- [gmx-users] Help with apolar solvent box
Justin A. Lemkul
- [gmx-users] RE: Help with apolar solvent box
Vitaly Chaban
- [gmx-users] Re: Help with apolar solvent box
Ragnarok sdf
- [gmx-users] Re: Help with apolar solvent box
Justin A. Lemkul
- [gmx-users] Re: help with neighborsearching error
Justin A. Lemkul
- [gmx-users] how to calculate the viscosity of the bulk
Yanmei Song
- [gmx-users] how to calculate the viscosity of the bulk
Justin A. Lemkul
- [gmx-users] how to calculate the viscosity of the bulk
Berk Hess
- [gmx-users] how to calculate the viscosity of the bulk
Yanmei Song
- [gmx-users] how to calculate the viscosity of the bulk
Yanmei Song
- [gmx-users] how to compute bending modulus of the membrane with NPs
Li Yang
- [gmx-users] how to convert the *.cube file to a (x, y, z) format file
Jinyao Wang
- [gmx-users] Re: how to convert the *.cube file to a (x, y, z) format file
sobereva
- [gmx-users] Re:Re: how to convert the *.cube file to a (x, y, z) format file
Jinyao Wang
- [gmx-users] Re:Re: how to convert the *.cube file to a (x, y, z) format file
sobereva
- [gmx-users] How to define new residue in GROMACS?
Yiming Chen
- [gmx-users] How to define new residue in GROMACS?
Tsjerk Wassenaar
- [gmx-users] how to get a solvent density map using volumeslice in VMD
Jinyao Wang
- [gmx-users] how to get a solvent density map using volumeslice in VMD
chris.neale at utoronto.ca
- [gmx-users] How to get log written to file ...
Dallas B. Warren
- [gmx-users] How to get log written to file ...
Mark Abraham
- [gmx-users] How to get log written to file ...
Dallas B. Warren
- [gmx-users] how to get the original pdb file about CG DNA mode
Dallas B. Warren
- [gmx-users] how to get the original pdb file about CG DNA model
He, Yang
- [gmx-users] How to show the created box?
Chih-Ying Lin
- [gmx-users] How to show the created box?
Mark Abraham
- [gmx-users] How to show the created box?
Dallas B. Warren
- [gmx-users] How to show the created box?
Lucio Montero
- [gmx-users] How to show the created box?
Matt Wyczalkowski
- [gmx-users] IBUPROFEN
Q. Y. HUAN
- [gmx-users] IBUPROFEN
Justin A. Lemkul
- [gmx-users] IN4 molecule type error
Mohammed Kamal
- [gmx-users] Re: IN4 molecule type error
Ms. Aswathy S
- [gmx-users] Re: IN4 molecule type error
Justin A. Lemkul
- [gmx-users] Re: IN4 molecule type error
Mark Abraham
- [gmx-users] Re: IN4 molecule type error
Mark Abraham
- [gmx-users] Re: IN4 molecule type error
Ms. Aswathy S
- [gmx-users] infinite polymer crystals at gromacs 4.x.x
Claus Valka
- [gmx-users] infinite polymer crystals at gromacs 4.x.x
David van der Spoel
- [gmx-users] infinite polymer crystals at gromacs 4.x.x
Berk Hess
- [gmx-users] input the gro and trr file into the VMD
He, Yang
- [gmx-users] input the gro and trr file into the VMD
He, Yang
- [gmx-users] input the gro and trr file into the VMD
XAvier Periole
- [gmx-users] input the gro and trr file into the VMD
He, Yang
- [gmx-users] input the gro and trr file into the VMD
Justin A. Lemkul
- [gmx-users] input the gro and trr file into the VMD
He, Yang
- [gmx-users] input the gro and trr file into the VMD
Berk Hess
- [gmx-users] Insertion of polymer into bilayer
varsha gautham
- [gmx-users] Insertion of polymer into bilayer
Mark Abraham
- [gmx-users] Insertion of polymer into the bilayer
varsha gautham
- [gmx-users] Insertion of polymer into the bilayer
Mark Abraham
- [gmx-users] install Gromacs 4.0.4 on Linux Fedora 8
oguz gurbulak
- [gmx-users] install Gromacs 4.0.4 on Linux Fedora 8
Justin A. Lemkul
- [gmx-users] install Gromacs 4.0.4 on Linux Fedora 8
oguz gurbulak
- [gmx-users] Re: install Gromacs 4.0.4 on Linux Fedora 8
oguz gurbulak
- [gmx-users] Re: install Gromacs 4.0.4 on Linux Fedora 8
Vitaly V. Chaban
- [gmx-users] Re: install Gromacs 4.0.4 on Linux Fedora 8
oguz gurbulak
- [gmx-users] Re: install Gromacs 4.0.4 on Linux Fedora 8
Vitaly V. Chaban
- [gmx-users] installation problem
Rafael Real Guerra
- [gmx-users] installation problem
Justin A. Lemkul
- [gmx-users] installation problem
Mark Abraham
- [gmx-users] installation problem
Jussi Lehtola
- [gmx-users] Interpretation of g_hbond results
Justin A. Lemkul
- [gmx-users] Interpretation of g_hbond results
Manik Mayur
- [gmx-users] Interpretation of g_hbond results
David van der Spoel
- [gmx-users] Interpretation of g_hbond results
Justin A. Lemkul
- [gmx-users] Interpretation of g_hbond results
Justin A. Lemkul
- [gmx-users] Interpretation of g_hbond results
David van der Spoel
- [gmx-users] Is Gromacs CUDA compatible
Jagdish S. Varma
- [gmx-users] Is Gromacs CUDA compatible
Vasilii Artyukhov
- [gmx-users] is the tip4p MW velocity treated differently in gromacs 3 vs 4
David van der Spoel
- [gmx-users] is the tip4p MW velocity treated differently in gromacs 3 vs 4
David van der Spoel
- [gmx-users] is the tip4p MW velocity treated differently in gromacs 3 vs 4
Berk Hess
- [gmx-users] is the tip4p MW velocity treated differently in gromacs 3 vs 4
Berk Hess
- [gmx-users] is the tip4p MW velocity treated differently in gromacs 3 vs 4
Chris Neale
- [gmx-users] is the tip4p MW velocity treated differently in gromacs 3 vs 4
Chris Neale
- [gmx-users] is the tip4p MW velocity treated differently in gromacs 3 vs 4
Chris Neale
- [gmx-users] is the tip4p MW velocity treated differently in gromacs 3 vs 4
chris.neale at utoronto.ca
- [gmx-users] Langevin Dyanamics in GROMACS
M Hafizur Rahman
- [gmx-users] Langevin Dyanamics in GROMACS
Justin A. Lemkul
- [gmx-users] Langevin Dyanamics in GROMACS
M Hafizur Rahman
- [gmx-users] Langevin Dyanamics in GROMACS
Mark Abraham
- [gmx-users] langevin dynamics and manual
Marius Retegan
- [gmx-users] lantibiotics
Peter Tieleman
- [gmx-users] Last frame number in trj
DimitryASuplatov
- [gmx-users] Last frame number in trj
Berk Hess
- [gmx-users] Ligand is moving far away after energy minimization
Ms. Aswathy S
- [gmx-users] Ligand is moving far away after energy minimization
Justin A. Lemkul
- [gmx-users] Magic Number Error in XTC file
Rebeca García Fandiño
- [gmx-users] Magic Number Error in XTC file
Justin A. Lemkul
- [gmx-users] make_hole
varsha gautham
- [gmx-users] make_hole
Mark Abraham
- [gmx-users] making .psf file based on .gro or .pdb
Hideya Nakamura
- [gmx-users] making .psf file based on .gro or .pdb
Chris Neale
- [gmx-users] Martini + other " force field "
DAVID RINCON
- [gmx-users] Martini + other " force field "
XAvier Periole
- [gmx-users] Martini + other " force field "
Elton Carvalho
- [gmx-users] Martini + other " force field "
XAvier Periole
- [gmx-users] Martini + other " force field "
Jones de Andrade
- [gmx-users] Martini Cg-model can not be downloaded!
Andrei Neamtu
- [gmx-users] Martini Cg-model can not be downloaded!
weixin
- [gmx-users] Re: Martini Cg-model can not be downloaded!
Andrei Neamtu
- [gmx-users] Martini Cg-model can not be downloaded!
XAvier Periole
- [gmx-users] Re: Martini Cg-model can not be downloaded!
sobereva
- [gmx-users] Martini Cg-model can not be downloaded!
weixin
- [gmx-users] Martini Cg-model can not be downloaded!
XAvier Periole
- [gmx-users] Martini Cg-model can not be downloaded!
xi zhao
- [gmx-users] Martini Cg-model can not be downloaded!
XAvier Periole
- [gmx-users] mass of a index group
Christian Seifert
- [gmx-users] mass of a index group
David van der Spoel
- [gmx-users] mass of a index group
Christian Seifert
- [gmx-users] mass of a index group
Justin A. Lemkul
- [gmx-users] mass of a index group
Christian Seifert
- [gmx-users] MD parameters for DPPC bilayer
Nikit sharan
- [gmx-users] MD parameters for DPPC bilayer
Justin A. Lemkul
- [gmx-users] mdrun error
supti mukherjee
- [gmx-users] mdrun error
Mark Abraham
- [gmx-users] mdrun halting
varsha gautham
- [gmx-users] mdrun halting
Justin A. Lemkul
- [gmx-users] Melittin in methanol...
sharada
- [gmx-users] Melittin in methanol...
Justin A. Lemkul
- [gmx-users] micelle disaggregated in serial, but not parallel, runs using sd integrator
chris.neale at utoronto.ca
- [gmx-users] micelle disaggregated in serial, but not parallel, runs using sd integrator
Berk Hess
- [gmx-users] micelle disaggregated in serial, but not parallel, runs using sd integrator
chris.neale at utoronto.ca
- [gmx-users] micelle disaggregated in serial, but not parallel, runs using sd integrator
Berk Hess
- [gmx-users] micelle disaggregated in serial, but not parallel, runs using sd integrator
Berk Hess
- [gmx-users] micelle disaggregated in serial, but not parallel, runs using sd integrator
Ran Friedman
- [gmx-users] micelle disaggregated in serial, but not parallel, runs using sd integrator
Berk Hess
- [gmx-users] micelle disaggregated in serial, but not parallel, runs using sd integrator
Ran Friedman
- [gmx-users] micelle disaggregated in serial, but not parallel, runs using sd integrator
Chris Neale
- [gmx-users] micelle disaggregated in serial, but not parallel, runs using sd integrator
Chris Neale
- [gmx-users] micelle disaggregated in serial, but not parallel, runs using sd integrator
Chris Neale
- [gmx-users] Missing atom error when using some force fields
Peggy Yao
- [gmx-users] Missing atom error when using some force fields
Justin A. Lemkul
- [gmx-users] monoclinic super cell
farzaneh fatahi
- [gmx-users] monoclinic super cell
farzaneh fatahi
- [gmx-users] monoclinic super cell
farzaneh fatahi
- [gmx-users] monoclinic super cell
farzaneh fatahi
- [gmx-users] monoclinic super cell
farzaneh fatahi
- [gmx-users] monoclinic super cell
farzaneh fatahi
- [gmx-users] monoclinic super cell
Martyn Winn
- [gmx-users] n-alkanes simulations in Gromacs
Molecular Dynamics
- [gmx-users] n-alkanes simulations in Gromacs
Mark Abraham
- [gmx-users] Nehalem
Rainer Bockmann
- [gmx-users] Re: Nehalem
sobereva
- [gmx-users] Re: Nehalem
Jones de Andrade
- [gmx-users] New ffAMBER Ports
Eric J. Sorin
- [gmx-users] Re: New ffAMBER Ports (Eric J. Sorin)
Alan
- [gmx-users] Nicelevel default 0 - mdrun_mpi of Gromacs 4.0.2
João M. Damas
- [gmx-users] Nicelevel default 0 - mdrun_mpi of Gromacs 4.0.2
Berk Hess
- [gmx-users] Nicelevel default 0 - mdrun_mpi of Gromacs 4.0.2
João M. Damas
- [gmx-users] Nicelevel default 0 - mdrun_mpi of Gromacs 4.0.2
Berk Hess
- [gmx-users] Nicelevel default 0 - mdrun_mpi of Gromacs 4.0.2
João M. Damas
- [gmx-users] Number of Frames in Trajectory
varsha gautham
- [gmx-users] Number of Frames in Trajectory
Mark Abraham
- [gmx-users] Number of processors in parallel running
Peggy Yao
- [gmx-users] Number of processors in parallel running
Justin A. Lemkul
- [gmx-users] Number of processors in parallel running
Peggy Yao
- [gmx-users] Number of processors in parallel running
Justin A. Lemkul
- [gmx-users] NVT or NPT ?
Chih-Ying Lin
- [gmx-users] NVT or NPT ?
chris.neale at utoronto.ca
- [gmx-users] NVT or NPT ?
Tsjerk Wassenaar
- [gmx-users] RE: NVT or NPT ?
Vitaly Chaban
- [gmx-users] obtaining gromacs for ubuntu (was Re: gmx-users Digest, Vol 58, Issue 125 (akalabya bissoyi))
Jussi Lehtola
- [gmx-users] obtaining gromacs for ubuntu (was Re: gmx-users Digest, Vol 58, Issue 125 (akalabya bissoyi))
chris.neale at utoronto.ca
- [gmx-users] One question about Domain decomposition
xuji
- [gmx-users] One question about Domain decomposition
Berk Hess
- [gmx-users] RE:RE: One question about Domain decomposition
xuji
- [gmx-users] RE:RE: One question about Domain decomposition
Berk Hess
- [gmx-users] RE: RE: RE:RE: One question about Domain decomposition
xuji
- [gmx-users] RE: RE: RE:RE: One question about Domain decomposition
Berk Hess
- [gmx-users] OPLS-AA topologies for ATP/ADP.
Lucio Ricardo Montero Valenzuela
- [gmx-users] OPLS-AA topologies for ATP/ADP.
Justin A. Lemkul
- [gmx-users] OPLS-AA topologies for ATP/ADP.
Lucio Montero
- [gmx-users] OPLS-AA topologies for ATP/ADP.
Bruce D. Ray
- [gmx-users] OPLS-AA topologies for ATP/ADP.
TJ Piggot
- [gmx-users] OPLS-AA topologies for ATP/ADP.
TJ Piggot
- [gmx-users] Oscillating Electrical Field
Benjamin Hall
- [gmx-users] Oscillating Electrical Field
David van der Spoel
- [gmx-users] P-N vector orientation
ANINDITA GAYEN
- [gmx-users] P-N vector orientation
XAvier Periole
- [gmx-users] P-N vector orientation
Nicolas
- [gmx-users] P-N vector orientation
Nicolas
- [gmx-users] P-N vector orientation
Berk Hess
- [gmx-users] P-N vector orientation
patrick fuchs
- [gmx-users] Parallel running of mdrun
Dallas B. Warren
- [gmx-users] Parallel running of mdrun
Chris Neale
- [gmx-users] Parallel running of mdrun
Dallas B. Warren
- [gmx-users] pdb2gmx: Bond type, Angle type, Dihedral angle type missing in topology file.
Mark Abraham
- [gmx-users] pdb2gmx: Bond type, Angle type, Dihedral angle type missing in topology file.
anoop dimri
- [gmx-users] Physical problems of comm removal
Christian Seifert
- [gmx-users] Physical problems of comm removal
Berk Hess
- [gmx-users] Physical problems of comm removal
Christian Seifert
- [gmx-users] Physical problems of comm removal
Berk Hess
- [gmx-users] Physical problems of comm removal
Christian Seifert
- [gmx-users] Physical problems of comm removal
Berk Hess
- [gmx-users] Physical problems of comm removal
Justin A. Lemkul
- [gmx-users] Physical problems of comm removal
XAvier Periole
- [gmx-users] Place compound in membrane
Casey,Richard
- [gmx-users] Place compound in membrane
Justin A. Lemkul
- [gmx-users] Placing a peptide above aqueous phase of bilayer
Nikit sharan
- [gmx-users] Please give me advises for the computing system.
Seungpyo Hong
- [gmx-users] Please give me advises for the computing system.
Mark Abraham
- [gmx-users] PLUMED release 1.0.0 available
Massimiliano Bonomi
- [gmx-users] Poor parallel performance in Ubuntu 8.04
Alexandre Suman de Araujo
- [gmx-users] Poor parallel performance in Ubuntu 8.04
Jussi Lehtola
- [gmx-users] Poor parallel performance in Ubuntu 8.04
Jussi Lehtola
- [gmx-users] Poor parallel performance in Ubuntu 8.04
Alexandre Suman de Araujo
- [gmx-users] Porcupine Plots
nahren manuel
- [gmx-users] Porcupine Plots
Mark Abraham
- [gmx-users] Porcupine Plots
Tsjerk Wassenaar
- [gmx-users] Porcupine Plots
Diego Enry Gomes
- [gmx-users] position restraint dynamics
bhargavi ch
- [gmx-users] position restraint dynamics
Justin A. Lemkul
- [gmx-users] position restraint dynamics
bhargavi ch
- [gmx-users] position restraint dynamics
chris.neale at utoronto.ca
- [gmx-users] Possible to stop mdrun changing file names whenusingcheckpoint files?
Dallas B. Warren
- [gmx-users] Possible to stop mdrun changing file names when usingcheckpoint files?
Dallas B. Warren
- [gmx-users] Possible to stop mdrun changing file names when usingcheckpoint files?
Dallas B. Warren
- [gmx-users] Possible to stop mdrun changing file names when usingcheckpoint files?
Berk Hess
- [gmx-users] Possible to stop mdrun changing file names when using checkpoint files?
Dallas B. Warren
- [gmx-users] Possible to stop mdrun changing file names when using checkpoint files?
Justin A. Lemkul
- [gmx-users] Possible to stop mdrun changing file names when using checkpoint files?
chris.neale at utoronto.ca
- [gmx-users] Postdoctoral position available
Shirts, Michael (mrs5pt)
- [gmx-users] PR dynamics
bhargavi ch
- [gmx-users] pre-compiled MacOS 3.3.2 gmx_sumi error
Tsjerk Wassenaar
- [gmx-users] pre-compiled MacOS 3.3.2 gmx_sumi error
Mark Abraham
- [gmx-users] pre-compiled MacOS 3.3.2 gmx_sumi error
Tsjerk Wassenaar
- [gmx-users] pre-compiled MacOS 3.3.2 gmx_sumi error
Dean Cuebas
- [gmx-users] Problem compiling gromacs with mopac
Subhrangshu Supakar
- [gmx-users] problem in creating topol.tpr file
nitu sharma
- [gmx-users] problem in creating topol.tpr file
Justin A. Lemkul
- [gmx-users] problem in creating topol.tpr file
Tsjerk Wassenaar
- [gmx-users] problem in gromacs installation
nitu sharma
- [gmx-users] problem in gromacs installation
Mark Abraham
- [gmx-users] problem in gromacs installation
nitu sharma
- [gmx-users] problem in gromacs installation
XAvier Periole
- [gmx-users] problem in gromacs installation
Manik Mayur
- [gmx-users] problem in gromacs installation
nitu sharma
- [gmx-users] problem in gromacs installation
Mark Abraham
- [gmx-users] problem in gromacs installation
Manik Mayur
- [gmx-users] problem in gromacs installation
nitu sharma
- [gmx-users] problem in gromacs installation
Mark Abraham
- [gmx-users] Problem in preparation of the enzyme/substrate complex
Justin A. Lemkul
- [gmx-users] Problem in preparation of the enzyme/substrate complex
Mark Abraham
- [gmx-users] Problem in preparation of the enzyme/substrate complex
Ji Liu
- [gmx-users] Problem in preparation of the enzyme/substrate complex
Tsjerk Wassenaar
- [gmx-users] Problem in preparation of the enzyme/substrate complex
Ji Liu
- [gmx-users] Problem in preparation of the enzyme/substrate complex
Tsjerk Wassenaar
- [gmx-users] Problem in preparation of the enzyme/substrate complex
Ji Liu
- [gmx-users] Problem in preparation of the enzyme/substrate complex
Tsjerk Wassenaar
- [gmx-users] Problem in preparation of the enzyme/substrate complex
Ji Liu
- [gmx-users] Problem in preparation of the enzyme/substrate complex
Tsjerk Wassenaar
- [gmx-users] Problem in preparation of the enzyme/substrate complex
Ji Liu
- [gmx-users] Problem in preparation of the enzyme/substrate complex
Mark Abraham
- [gmx-users] problem in running gromacs
nitu sharma
- [gmx-users] problem in running gromacs
Mark Abraham
- [gmx-users] problem in running gromacs
Tsjerk Wassenaar
- [gmx-users] problem in running gromacs
nitu sharma
- [gmx-users] problem in running gromacs
Manik Mayur
- [gmx-users] problem in running gromacs
Mark Abraham
- [gmx-users] problem in running gromacs demo
nitu sharma
- [gmx-users] problem in running gromacs demo
Mark Abraham
- [gmx-users] Problem using MPIRUN MDRUN
fprisch at nimr.mrc.ac.uk
- [gmx-users] Problem using MPIRUN MDRUN
Mark Abraham
- [gmx-users] Problem using MPIRUN MDRUN
osmair oliveira
- [gmx-users] Problem using MPIRUN MDRUN
fprisch at nimr.mrc.ac.uk
- [gmx-users] Problem using MPIRUN MDRUN
Mark Abraham
- [gmx-users] Problem using MPIRUN MDRUN
fprisch at nimr.mrc.ac.uk
- [gmx-users] Problem using MPIRUN MDRUN
Mark Abraham
- [gmx-users] Problem with adding H using amber03
Peggy Yao
- [gmx-users] Problem with adding H using amber03
Justin A. Lemkul
- [gmx-users] Problem with continuation of files using checkpoint files
Monika Sharma
- [gmx-users] Problem with continuation of files using checkpoint files
Berk Hess
- [gmx-users] Problem with decane box
Ragnarok sdf
- [gmx-users] Problem with decane box
Justin A. Lemkul
- [gmx-users] Problem with different version
Shaghayegh Vafaei
- [gmx-users] Problem with different version!!
Shaghayegh Vafaei
- [gmx-users] Problem with different version!!
Justin A. Lemkul
- [gmx-users] problem with variable fio in REMD
Rebeca García Fandiño
- [gmx-users] problem with variable fio in REMD
Rebeca García Fandiño
- [gmx-users] problem with variable fio in REMD
Justin A. Lemkul
- [gmx-users] protein crystallization
Santan William
- [gmx-users] protein crystallization
Justin A. Lemkul
- [gmx-users] protein structure prediction
José Carlos Calvo Tudela
- [gmx-users] protein structure prediction
Mark Abraham
- [gmx-users] protein structure prediction
Per Larsson
- [gmx-users] protein structure prediction
José Carlos Calvo Tudela
- [gmx-users] protein structure prediction
José Carlos Calvo Tudela
- [gmx-users] pull code, lambda, and soft core availability
chris.neale at utoronto.ca
- [gmx-users] pull code, lambda, and soft core availability
Matt Wyczalkowski
- [gmx-users] pull code, lambda, and soft core availability
chris.neale at utoronto.ca
- [gmx-users] pull code, lambda, and soft core availability
chris.neale at utoronto.ca
- [gmx-users] Pull Peptide Apart
Joseph Johnson
- [gmx-users] Pull Peptide Apart
Mark Abraham
- [gmx-users] pull_pbcatom appears global and could benifit from a sanity check during grompp
Berk Hess
- [gmx-users] pull_pbcatom appears global and could benifit from a sanity check during grompp
chris.neale at utoronto.ca
- [gmx-users] pull_pbcatom appears global and could benifit from a sanity check during grompp
chris.neale at utoronto.ca
- [gmx-users] QMMM/mopac install
osmair oliveira
- [gmx-users] QMMM/mopac install
Justin A. Lemkul
- [gmx-users] QMMM/mopac install
osmair oliveira
- [gmx-users] QMMM/mopac install
Justin A. Lemkul
- [gmx-users] question about .trr file
Anna Marabotti
- [gmx-users] question about .trr file
Justin A. Lemkul
- [gmx-users] question about .trr file
Mark Abraham
- [gmx-users] Question about confining simulations to inert spherical pores
Chester McLester
- [gmx-users] R: help with neighborsearching error
Anna Marabotti
- [gmx-users] R: help with neighborsearching error
Justin A. Lemkul
- [gmx-users] R: help with neighborsearching error
Justin A. Lemkul
- [gmx-users] R: neighborsearching error
Anna Marabotti
- [gmx-users] R: neighborsearching error
Justin A. Lemkul
- [gmx-users] R: neighborsearching error
Anna Marabotti
- [gmx-users] R: neighborsearching error
Justin A. Lemkul
- [gmx-users] R: R: help with neighborsearching error
Anna Marabotti
- [gmx-users] R: R: help with neighborsearching error
Justin A. Lemkul
- [gmx-users] R: Re: question about .trr file
Anna Marabotti
- Re (in reply to Tsjerk): [gmx-users] Porcupine Plots
Tsjerk Wassenaar
- Re (in reply to Tsjerk): [gmx-users] Porcupine Plots
nahren manuel
- [gmx-users] Reidue UNK not found
ksm tprk
- [gmx-users] Reidue UNK not found
Dallas B. Warren
- [gmx-users] replica restart from checkpoints
Massimiliano Bonomi
- [gmx-users] replica restart from checkpoints
Berk Hess
- [gmx-users] replica restart from checkpoints
Massimiliano Bonomi
- [gmx-users] replica restart from checkpoints
Berk Hess
- [gmx-users] replica restart from checkpoints
Berk Hess
- [gmx-users] replica restart from checkpoints
Massimiliano Bonomi
- [gmx-users] replica restart from checkpoints
Berk Hess
- [gmx-users] replica restart from checkpoints
Massimiliano Bonomi
- [gmx-users] Residue name
Dinesh Pinisetty
- [gmx-users] Residue name
Justin A. Lemkul
- [gmx-users] RPM and double precision
Casey,Richard
- [gmx-users] RPM and double precision
Berk Hess
- [gmx-users] RPM and double precision
Casey,Richard
- [gmx-users] RPM and double precision
Justin A. Lemkul
- [gmx-users] Rtp for polymer.
varsha gautham
- [gmx-users] Rtp for polymer.
Mark Abraham
- [gmx-users] Rtp for polymer.
Andrea Muntean
- [gmx-users] Seg Fault in water and alcohol run
Caleb Carlin
- [gmx-users] Segfault with the v-rescale thermostat in Gromacs 4.0.3
Berk Hess
- [gmx-users] Segfault with the v-rescale thermostat in Gromacs 4.0.3
Ondrej Marsalek
- [gmx-users] segmentation fault
Sunil Thapa
- [gmx-users] segmentation fault
David van der Spoel
- [gmx-users] segmentation fault after mdrun
Nikit sharan
- [gmx-users] segmentation fault after mdrun
Mark Abraham
- [gmx-users] segmentation fault after mdrun
Justin A. Lemkul
- [gmx-users] segmentation fault after mdrun
Nikit sharan
- [gmx-users] segmentation fault after mdrun
Carsten Kutzner
- [gmx-users] segmentation fault after mdrun
Justin A. Lemkul
- [gmx-users] Segmentation fault in g_traj with -mol opion
Steve Fiedler
- [gmx-users] set up self assembly for mixture of lipids using genbox
Mark Abraham
- [gmx-users] Re: set up self assembly for mixture of lipids using genbox
maria goranovic
- [gmx-users] Re: set up self assembly for mixture of lipids using genbox
Mark Abraham
- [gmx-users] set up self assembly for mixture of lipids using genbox
maria goranovic
- [gmx-users] shake for water
David Mobley
- [gmx-users] shake for water
David van der Spoel
- [gmx-users] shake for water
Berk Hess
- [gmx-users] shake for water
Berk Hess
- [gmx-users] shake for water
David van der Spoel
- [gmx-users] shake for water
Berk Hess
- [gmx-users] shake for water
Berk Hess
- [gmx-users] shake for water
David Mobley
- [gmx-users] shake for water
David Mobley
- [gmx-users] shake for water
David Mobley
- [gmx-users] shake for water
Berk Hess
- [gmx-users] shake for water
David Mobley
- [gmx-users] shake for water
David van der Spoel
- [gmx-users] SIMULATED ANNEALING
sharada
- [gmx-users] SIMULATED ANNEALING
Mark Abraham
- [gmx-users] SIMULATED ANNEALING
sharada
- [gmx-users] SIMULATED ANNEALING
Mark Abraham
- [gmx-users] Simulated annealing
jayant james
- [gmx-users] Simulated annealing
Justin A. Lemkul
- [gmx-users] SO3- force field
Jin Hee
- [gmx-users] SO3- force field
David van der Spoel
- [gmx-users] SO3- force field
Lucio Ricardo Montero Valenzuela
- [gmx-users] SO3- force field
Justin A. Lemkul
- [gmx-users] structure factor
Alexander Malafeev
- Subject: [gmx-users] gromacs QM/MM
Gerrit Groenhof
- [gmx-users] Table potential example
ROHIT MALSHE
- [gmx-users] Table potential example
David van der Spoel
- [gmx-users] template
Alexander Malafeev
- [gmx-users] template
Mark Abraham
- [gmx-users] template
Alexander Malafeev
- [gmx-users] template
Mark Abraham
- [gmx-users] The difference about NPT and NVT ensemble.
fufengliu
- [gmx-users] The difference about NPT and NVT ensemble.
Justin A. Lemkul
- [gmx-users] The difference about NPT and NVT ensemble.
Dallas B. Warren
- [gmx-users] trajectory file in the VMD
He, Yang
- [gmx-users] trjconv fit subset of atoms
Joshua Adelman
- [gmx-users] trjconv fit subset of atoms
Berk Hess
- [gmx-users] trjconv fit subset of atoms
Tsjerk Wassenaar
- [gmx-users] trjconv fit subset of atoms
Joshua Adelman
- [gmx-users] trjconv fit subset of atoms
Tsjerk Wassenaar
- [gmx-users] trjconv fit subset of atoms
Joshua Adelman
- [gmx-users] Turning off electrostatic or Van der Waals interactions
Justin A. Lemkul
- [gmx-users] Turning off electrostatic or Van der Waals interactions
Justin A. Lemkul
- [gmx-users] Turning off electrostatic or Van der Waals interactions
Berk Hess
- [gmx-users] Turning off electrostatic or Van der Waals interactions
Lee Soin
- [gmx-users] Turning off electrostatic or Van der Waals interactions
Omer Markovitch
- [gmx-users] Turning off electrostatic or Van der Waals interactions
Lee Soin
- [gmx-users] Turning off electrostatic or Van der Waals interactions
Lee Soin
- [gmx-users] Unit conversion
jitrayut jitonnom
- [gmx-users] Unit conversion
Mark Abraham
- [gmx-users] using packmol in Gromacs 3
John Bennett
- [gmx-users] using packmol in Gromacs 3
Justin A. Lemkul
- [gmx-users] vanishing trr file
Homa Azizian
- [gmx-users] vanishing trr file
Mark Abraham
- [gmx-users] Virial from non-bonded forces
Omololu Akin-Ojo
- [gmx-users] Virial from non-bonded forces
David van der Spoel
- [gmx-users] Virial from non-bonded forces
Omololu Akin-Ojo
- [gmx-users] Virtual atom
Georgios Patargias
- [gmx-users] Virtual atom
Tsjerk Wassenaar
- [gmx-users] visualizing trajectories real-time
Jack Shultz
- [gmx-users] Which force field to use to study intra-molecular hydrogen bonding?
Peggy Yao
- [gmx-users] Which force field to use to study intra-molecular hydrogen bonding?
Justin A. Lemkul
Last message date:
Sat Feb 28 19:53:10 CET 2009
Archived on: Thu Nov 14 12:06:14 CET 2013
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