[gmx-users] Virtual atom

[Tsjerk Wassenaar]

Hi,

The virtual atoms are residue-bound and will have the same residue
name as the atoms it is constructed from. There's no residue name DUM
introduced.

Tsjerk

On Thu, Feb 19, 2009 at 4:06 PM, Georgios Patargias
<G.N.Patargias at leeds.ac.uk> wrote:
> Hello
>
> When a virtual atom is constructed from a two protein atoms, is it
> considered a protein atom itself? Should a residue called DUM be
> added to the aminoacids.dat file? Thanks.
>
> Best wishes
> George
>
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
>



-- 
Tsjerk A. Wassenaar, Ph.D.
Junior UD (post-doc)
Biomolecular NMR, Bijvoet Center
Utrecht University
Padualaan 8
3584 CH Utrecht
The Netherlands
P: +31-30-2539931
F: +31-30-2537623