[gmx-users] GridMat MD Plot

[Justin A. Lemkul]

Hi,

We recently released version 1.0.2, which contains an accessory script for 
properly formatting the output data for GNUPlot.  Please download the new 
version, read the documentation, and try again.

-Justin

Anirban Ghosh wrote:
> Hi ALL,
> 
> I ran a membrane simulation and for analysis I came across the GridMat 
> MD software. However I am not able to plot the output values (Z values 
> of a 20x20 matrix) as given in 
> http://bevanlab.biochem.vt.edu/GridMAT-MD/examples.html .
> In my system Xmatrix is not working and I am trying to use GNUPlot for 
> plotting. But I am not able to plot them properly. Can anyone suggest me 
> how to plot the single column Z values in GNUPlot to get a contour map? 
> Any suggestion is welcome.
> 
> Regards,
> 
> 
>  
> *Anirban Ghosh*
> *Grade Based Engineer
> Bioinformatics Team
> Centre for Development of Advanced Computing (C-DAC)
> Pune, India
> *
> 
> 
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-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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