[gmx-users] GridMat MD Plot

Anirban Ghosh anirbanz83 at yahoo.co.in
Tue Jul 14 11:07:48 CEST 2009


Hi ALL,

I ran a membrane simulation and for analysis I came across the GridMat MD software. However I am not able to plot the output values (Z values of a 20x20 matrix) as given in http://bevanlab.biochem.vt.edu/GridMAT-MD/examples.html . 
In my system Xmatrix is not working and I am trying to use GNUPlot for plotting. But I am not able to plot them properly. Can anyone suggest me how to plot the single column Z values in GNUPlot to get a contour map? Any suggestion is welcome.

Regards,


 Anirban GhoshGrade Based Engineer
Bioinformatics Team
Centre for Development of Advanced Computing (C-DAC)
Pune, India



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