[gmx-users] parameters for Phosphorylated threonine and serine

Justin A. Lemkul jalemkul at vt.edu
Sun Jul 19 13:45:31 CEST 2009



nikhil damle wrote:
> *.tar gives error during extracting saying that it is not a .tar archive.
> 

Works fine for me.  What are you doing to try to open it?

-Justin

> Regards,
> Nikhil
> 
> ------------------------------------------------------------------------
> *From:* Justin A. Lemkul <jalemkul at vt.edu>
> *To:* Discussion list for GROMACS users <gmx-users at gromacs.org>
> *Sent:* Saturday, 18 July, 2009 9:31:01 PM
> *Subject:* Re: [gmx-users] parameters for Phosphorylated threonine and 
> serine
> 
> 
> 
> nikhil damle wrote:
>  > Hi,
>  >
>  > Can anyone suggest me where to get phosphorylated ser and threonine 
> parameters ?
>  >
> 
> The ffG43a1p tarball is available under User Contributions on the 
> Gromacs website:
> 
> http://www.gromacs.org/index.php?title=Download_%26_Installation/User_contributions/Force_fields
> 
> As I recall, there were some formatting problems with some of the files 
> (they were made under a very old Gromacs version, and some formatting 
> has since changed).  If you run into problems, you may contact me 
> off-list; I should have the corrected files.
> 
> -Justin
> 
>  > Regards,
>  > Nikhil
>  >
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> -- ========================================
> 
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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