[gmx-users] Error in hdb file ffG43a1p.hdb

Thamu asthamu at gmail.com
Fri Jul 24 05:58:13 CEST 2009


i am trying to run md for protein-peptide complex. the peptide has
phosphorylated tyrosine.

i got the following error when i run pdb2gmx

Fatal error:
Error in hdb file ffG43a1p.hdb:
Wrong number of control atoms (2 iso 3) on line:
    1    1    N    -C    CA

I would greatly appreciate if some one help me to solve this error.

Thanking you,

Yours sincerely,
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20090724/b4baee7e/attachment.html>

More information about the gromacs.org_gmx-users mailing list