[gmx-users] how to include Fe-S topology in .rtp file

amri ta amrita0092002 at yahoo.co.in
Mon Jun 8 08:00:47 CEST 2009

hi all...
I am simulating a protein with Fe-S cluster. What is the protocol for generating a .rtp file with Fe-S topology...As i am using ffG43a1 forcefield.. i searched FFG43a1bon.itp file for Fe-S bond, angle and dihedral type... but it is not there..what i should do?..
If anyone have the idea of the procedure..please outline me the procedure..
Ph.D scholar,
Burdwan University.

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