[gmx-users] problem in running grompp

Samik Bhattacharya samikbhat at yahoo.co.in
Wed Jun 10 12:33:28 CEST 2009

hi, i am simulating a membrane protein inside dppc bilayer and in this regard i am following justin's tutorial. but i ma facing a problem in running grompp...whenever i run it is giving error 

Program grompp, VERSION 4.0.5
Source code file: grompp.c, line: 362

Fatal error:
number of coordinates in coordinate file (1A68_genbox.gro, 49128)
             does not match topology (1A68.top, 48628)

now how to solve this problem? i have first generated the lipid box  with the protein then solvated it. i really need little bit of help to proceed to the next step...
Thaking You...

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