[gmx-users] What is the important thing when we are watching the MD trajectory movie?
Mark.Abraham at anu.edu.au
Sat Jun 20 03:41:59 CEST 2009
Chih-Ying Lin wrote:
> What is the important thing when we are watching the MD trajectory movie?
Popcorn :-) Seriously, it depends on the objective of the simulation. If
you're looking for some rare event to occur and can't define a numerical
criterion for which to search, you might watch for it. Most of my
simulations only get watched to check that nothing obviously stupid is
> Are people watching the whole trajectory movie?
> It might take 3-4 hours or longer.
> What is the efficient way to watch the trajectory movie?
You don't have to save every frame (see .mdp options), nor watch every
frame (see trjconv and/or your viewer options).
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