[gmx-users] 4.0.5 Installation error

Manik Mayur manik.mayur at gmail.com
Mon Jun 29 09:24:28 CEST 2009


Hi,
I am trying to install GROMACS-4.0.5, but while making mpirun with the
option --enable-mpi it gives the following sets of errors:

../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to
`ah_find'
../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to
`lam_ksignal'
../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to
`lam_arr_append'
../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to
`ah_delete'
../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to
`lam_errorstr'
../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to
`lam_ssi_cr_did'
../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to
`lam_rtrnameget'
../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to
`lam_mutex_trylock'
...................
...................

The important thing to note is that I have successfully compiled and
installed mpi version of mdrun on the same machine, for GROMACS-4.0.4.
What am I missing here?
Thanks,

Manik Mayur
Graduate student
Microfluidics Lab
Dept. of Mechanical Engg.
IIT Kharagpur
INDIA
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20090629/4ecb7ac9/attachment.html>


More information about the gromacs.org_gmx-users mailing list