[gmx-users] regarding dimethylated lysine topology file

Anil Kumar chemanil at gmail.com
Mon Mar 2 12:34:08 CET 2009

Dear Prasun,

I think you can get the help of Chem 3D for fixing this problem. First you
have to generate the topology with Chem 3D then get the gromacs format with
PRODRG server of the same.

I hope it will help you,
with regards

On Mon, Mar 2, 2009 at 2:21 PM, prasun kumar <prasun30 at gmail.com> wrote:

> respected all
> I m tryin to generate a topology file for dimethylated lysine using PRODRG
> server,but I found that its not working...........can you plz help me in
> gettin some another servers or any method...........
> is it possible to change gromacs topology file to charmm topology file
> thanx in advance
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