[gmx-users] where is the normalization direction in radial axial g_densmap plots?

[maria goranovic]

I made a radial-axial density plot using g_densmap. What one gets out is a
3-D number density as a function of radial and axial distance from the
defined axis. So which is the third direction, and how is it averaged out?
Sorry if this is a very elementary question

g_densmap -f protein.xtc -s protein.tpr -n proteinndx -o protein.xpm -b
10000 -e 30000 -bin 0.01 -amax 2 -rmax 2 -dmax 40



-- 
Maria G.
Technical University of Denmark
Copenhagen
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20090511/0754cd47/attachment.html>