[gmx-users] problem in simulation of DNA-protein complex

nitu sharma sharmanitu35 at gmail.com
Wed May 13 09:24:57 CEST 2009

Dear all

                    I  am getting problem in running pdb2gmx command on
DNA_protein file . The prblem is
Program pdb2gmx, VERSION 4.0.3
Source code file: resall.c, line: 426

Fatal error:
Residue 'T' not found in residue topology database

So , actually I am unable to understand what should I do to solve this .

Is it possible to get DNA.itp file from anywhere .If anyone have Idea about
this please help me.

I really will be very thankful for him/her.

Nitu sharma
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