[gmx-users] Density histogram in Ramachandran plot
Mark.Abraham at anu.edu.au
Fri Nov 13 00:49:14 CET 2009
> I wonder if there is an easy way I am missing to get a density histogram
> from the Ramachandran plot over a trajectory as outputted by g_rama. All
> I see are big, uniform black blobs and they're not helpful, because with
> tons of data points a density plot would be much more informative. Thanks!
It's not quite what you want, but using -dt you can have fewer data
points. Bear in mind that trajectory snapshots "too close" in time
aren't independent data anyway...
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