[gmx-users] Decreasing MSD of ligand ?

[Omer Markovitch]

Is the decrease occurs in the long times? Omer.

On Tue, Nov 17, 2009 at 21:08, Chih-Ying Lin <chihying2008 at gmail.com> wrote:

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> HI MSD = mean square displacement diffusion coefficient = d/dt (MSD) I
> simulate the protein and ligand system and then calculate the MSD of the
> ligand. Then, i drew the plot of the time evolution of the MSD. But the the
> MSD decreases as time for some period. I see nothing about my codings. Would
> you please tell me about any possible errors i made? Thank you Lin
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