[gmx-users] how to make a porcupine plot?

Justin A. Lemkul jalemkul at vt.edu
Fri Nov 20 04:15:16 CET 2009

AntonioLeung wrote:
> Hi, all,
> I am newcomer of gmx, and I want to know how to make a porcupine plot 
> after a essential MD. I found it looks nicer than linear interpolations 
> between two extremes.
> Thanks in advance!

There are not tools in Gromacs to do such a thing, but a simple Google search 
will turn up a number of external software/servers that can.  For example, the 
first Google hit:



> Atonio


Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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