[gmx-users] help regarding gromacs

[Mark Abraham]

On 6/04/2010 2:42 PM, harish sharma wrote:
> I am working on Gromacs 3.3.1, but when i run the simulation i got the

Don't, unless you definitely need scientific continuity. GROMACS 4 is 
much faster.

> /Warning: 1-4 interaction between 12 and 19 at distance 1.469 which is
> /larger than the 1-4 table size 1.000 nm/ These are ignored for the rest
> of the simulation /This usually means your system is exploding,/if not,
> you should increase table-extension in your mdp file./////
> /////But the mdp file i m using have no parameter named
> table-extension.So please tell me how to get rid of this warning./////

See 
http://www.gromacs.org/index.php?title=Documentation/Errors&highlight=errors#1-4_interaction_not_within_cut-off

Mark