[gmx-users] Re: gromacs
Liu Shiyong
liushiyong at gmail.com
Wed Apr 21 10:41:02 CEST 2010
All 63 kernel tests PASSED
Here follows a list of the lines in reference_s.log and ener.log which did
not
pass the comparison test within tolerance 0.05
Index Reference This test Error Description
11 -34.5967 -42.0952 0.0977748 1aml.pdb with G53a6 using
vsite=none and water=spc
12 -34.5967 -42.0952 0.0977748 1aml.pdb with G53a6 using
vsite=none and water=spce
There were 2/45 differences in final energy with the reference file
pdb2gmx tests FAILED
On Wed, Apr 21, 2010 at 4:36 PM, Liu Shiyong <liushiyong at gmail.com> wrote:
> Dear all,
>
> I download gromacs-4.0.5 and installed it.
>
> I got the test by git.
>
> git clone git://git.gromacs.org/regressiontests.git
>
>
> then:
>
> Testing fe_test . . . PASSED
> Testing field . . . FAILED. Check checkvir.out (264 errors) files in field
> Testing nacl . . . PASSED
> Testing sw . . . PASSED
> Testing tip4p . . . FAILED. Check checkvir.out (95 errors) files in tip4p
> Testing tip4pflex . . . PASSED
> Testing urea . . . PASSED
> Testing water . . . FAILED. Check checkvir.out (145 errors) files in water
> 3 out of 14 complex tests FAILED
>
> Best
>
>
> --
> Shiyong Liu
> ------------------------------------------------------------------
> Biomolecular Physics and Modeling Group, Department of Physics,
> Huazhong University of Science and Technology, Wuhan 430074, Hubei, China
> Tel:86-27-87558335-608
> ------------------------------------------------------------------
> Chinese Version:
> ------------------------------------------------------------------
> 刘士勇
> 华中科技大学物理学院 生物物理模建小组
> 湖北省武汉市洪山区珞瑜路1037号
> 邮编:430074
> 电话:86-27-87558335-606
> -------------------------------------------------------------------
>
--
Shiyong Liu
------------------------------------------------------------------
Biomolecular Physics and Modeling Group, Department of Physics,
Huazhong University of Science and Technology, Wuhan 430074, Hubei, China
Tel:86-27-87558335-608
------------------------------------------------------------------
Chinese Version:
------------------------------------------------------------------
刘士勇
华中科技大学物理学院 生物物理模建小组
湖北省武汉市洪山区珞瑜路1037号
邮编:430074
电话:86-27-87558335-606
-------------------------------------------------------------------
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